RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 METRNQ9UJH8 293 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 VSIG4Q9Y279 399 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 PKDREJQ9NTG1 2253 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 A0A087WWC5 75 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 CEACAM18A8MTB9 384 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF737O75373 536 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF205O95201 554 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ARG1P05089 322 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 SCTP09683 121 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 FPR2P25090 351 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ECI1P42126 302 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 AADACL3Q5VUY0 350 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM268Q5VZI3 342 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TEX38Q6PEX7 206 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 LINC01551Q86U37 167 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TGIF2LYQ8IUE0 185 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 OR5M8Q8NGP6 311 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 SNX22Q96L94 193 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM106BQ9NUM4 274 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 OOEPA6NGQ2 149 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 FCGR2CP31995 323 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 PPOXP50336 477 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM33P57088 247 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 HLA-DRB3P79483 266 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 AESQ08117 197 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 BTNL3Q6UXE8 466 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
CCDC39-201ENST00000442201 SMPXQ9UHP9 88 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 GPR132Q9UNW8 380 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TRBV6-7A0A0A0MS04 114 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TRAV38-1A0A0B4J264 116 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 IGHV1-69-2A0A0G2JMI3 117 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM178BH3BS89 294 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 CCSO14618 274 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 MGST3O14880 152 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 OR2C1O95371 312 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 AMBPP02760 352 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PGAM2P15259 253 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TEX36Q5VZQ5 186 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 STUMQ69YW2 141 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 MRPL41Q8IXM3 137 aaKnown RBP6.73□□□□□ -1.33
CCDC39-201ENST00000442201 ABHD5Q8WTS1 349 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 COQ2Q96H96 371 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TXN2Q99757 166 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PARP11Q9NR21 331 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 SLC2A9Q9NRM0 540 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 KCNIP1Q9NZI2 227 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 ABCA4P78363 2273 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PPIAL4EA0A075B759 164 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TRAV39A0A0B4J263 110 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 F5H0A9 414 aaPredicted RBP6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PPIAL4DF5H284 164 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PPIAL4FP0DN26 164 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TAS2R31P59538 309 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 HERV-K104P61576 105 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 OR5I1Q13606 314 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 ELOBQ15370 118 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 C11orf42Q8N5U0 333 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 COMMD1Q8N668 190 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 SDSLQ96GA7 329 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM56Q96MV1 263 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF665Q9H7R5 613 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 PPIAL4AQ9Y536 164 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM56-RWDD3S4R434 201 aa6.73□□□□□ -1.33
CCDC39-201ENST00000442201 K7N7A8 449 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 PAX5Q02548 391 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 UBE2V1Q13404 147 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 EDDM3AQ14507 147 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 ZNRF1Q8ND25 227 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 OR5D13Q8NGL4 314 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 TOMM40LQ969M1 308 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 RAB1BQ9H0U4 201 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 LIME1Q9H400 295 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 TAF9BQ9HBM6 251 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 C14orf166Q9Y224 244 aaKnown RBP6.72□□□□□ -1.33
CCDC39-201ENST00000442201 HCFC1P51610 2035 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 C22orf46C9J442 243 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 GYPAP02724 150 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 DANCRP0C864 163 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF728P0DKX0 622 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 AKR1C4P17516 323 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 GLIPR1P48060 266 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 FXYD4P59646 89 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF788Q6ZQV5 615 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 DTX2Q86UW9 622 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 SECTM1Q8WVN6 248 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 IL1F10Q8WWZ1 152 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 C5orf66Q9H5L9 145 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 DOPEY1Q5JWR5 2465 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 IGKV1-6A0A0C4DH72 117 aa6.72□□□□□ -1.33
CCDC39-201ENST00000442201 A0A1W2PPR1 153 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms