RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ABHD12Q8N2K0 398 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 OR10P1Q8NGE3 313 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 C8orf46Q8TAG6 207 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LEAP2Q969E1 77 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 MARC2Q969Z3 335 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ARV1Q9H2C2 271 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 C11orf1Q9H5F2 150 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 HEYLQ9NQ87 328 aaPredicted RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 TMEM140Q9NV12 185 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 AUP1Q9Y679 476 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ANKRD11Q6UB99 2663 aaPredicted RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 PCNX1Q96RV3 2341 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 RAB19A4D1S5 217 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LEUTXA8MZ59 168 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 M0R1W7 72 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 FGF16O43320 207 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 RAMP3O60896 148 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 CST7O76096 145 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 F12P00748 615 aaPredicted RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 IGHV3-7P01780 117 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 IGHV1-8P0DP01 117 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 SLC38A11Q08AI6 406 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 AANATQ16613 207 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 POU2AF1Q16633 256 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 FAM74A1Q5RGS3 127 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ZNF833PQ6ZTB9 187 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 STPG2Q8N412 459 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ZNF709Q8N972 641 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LFNGQ8NES3 379 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 OR4A5Q8NH83 315 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 C5orf30Q96GV9 206 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 TMEM147Q9BVK8 224 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 KCNIP2Q9NS61 270 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ONECUT1Q9UBC0 465 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 WASHC3Q9Y3C0 194 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LOC105371242A0A075B767 164 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 A0A087X0M5 115 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 A0A1B0GX30 115 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LYNX1G3V0Z9 82 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 KCNAB3O43448 404 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 ENSAO43768 121 aaKnown RBP4.95□□□□□ -1.62
VPS50-205ENST00000441602 HBE1P02100 147 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 OR8U8P0C7N1 319 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 P0C879 139 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 LYNX1P0DP58 116 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 F2RL1P55085 397 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 NHLH2Q02577 135 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 SSX9Q7RTT3 188 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 TMEM217Q8N7C4 229 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 RHOVQ96L33 236 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 PARP11Q9NR21 331 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 MMP26Q9NRE1 261 aa4.95□□□□□ -1.62
VPS50-205ENST00000441602 KIAA2026Q5HYC2 2103 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 TSPAN15O95858 294 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 IFNA10P01566 189 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 SOD3P08294 240 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 HSPE1P61604 102 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 RPS16P62249 146 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 TMEM267Q0VDI3 215 aaPredicted RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 FAM53AQ6NSI3 398 aaPredicted RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 Q6ZRM9 215 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 ZNF383Q8NA42 475 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 PCNPQ8WW12 178 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 DDB2Q92466 427 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 LHX4Q969G2 390 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 FLYWCH2Q96CP2 140 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 SPOCK3Q9BQ16 436 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 PBDC1Q9BVG4 233 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 SSBP3Q9BWW4 388 aaPredicted RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 PARD6GQ9BYG4 376 aaPredicted RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 FBXO7Q9Y3I1 522 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 NCOR2Q9Y618 2525 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 BTBD17A6NE02 478 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 C17orf112F2Z3M2 114 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 H3BP45 60 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 METTL15P1P0C7V9 234 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 LGALS7P47929 136 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 ZNF134P52741 427 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 IZUMO4Q1ZYL8 232 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 ZNF429Q86V71 674 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 EIF4E3Q8N5X7 224 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 KIR3DL3Q8N743 410 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 RPEQ96AT9 228 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 CXorf58Q96LI9 332 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 HARBI1Q96MB7 349 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 MRPL20Q9BYC9 149 aaKnown RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 PLEKHA3Q9HB20 300 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 UQCC1Q9NVA1 299 aa4.94□□□□□ -1.62
VPS50-205ENST00000441602 FOXA2Q9Y261 457 aaPredicted RBP4.94□□□□□ -1.62
VPS50-205ENST00000441602 A0A1W2PN81 502 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 UPK2O00526 184 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 SPP1P10451 314 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 COX6B1P14854 86 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 IGFBP2P18065 325 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 USF1P22415 310 aaPredicted RBP4.93□□□□□ -1.62
VPS50-205ENST00000441602 CHRNA7P36544 502 aa4.93□□□□□ -1.62
VPS50-205ENST00000441602 PAX9P55771 341 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms