RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TRGV3P03979 118 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 LGALS1P09382 135 aaKnown RBP15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 CTXN2P0C2S0 81 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 CD36P16671 472 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 C19orf54Q5BKX5 351 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 SLA2Q9H6Q3 261 aa15.41■□□□□ 0.06
SHROOM1-204ENST00000440118 LINC01619G3V211 115 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 OVOL1O14753 267 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 CRYZL1O95825 349 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 EGR2P11161 476 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 KIAA0141Q14154 515 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 VMA21Q3ZAQ7 101 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 TSPAN14Q8NG11 270 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 PRR25Q96S07 402 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 PHB2Q99623 299 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 DCUN1D5Q9BTE7 237 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 DCSTAMPQ9H295 470 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 ETV7Q9Y603 341 aa15.4■□□□□ 0.06
SHROOM1-204ENST00000440118 SAP30O75446 220 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 NFYAP23511 347 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 SLURP1P55000 103 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 ASPHD1Q5U4P2 390 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 DCUN1D4Q92564 292 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 C5orf30Q96GV9 206 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 RNF167Q9H6Y7 350 aa15.39■□□□□ 0.05
SHROOM1-204ENST00000440118 SORL1Q92673 2214 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 C13orf42A0A1B0GVH6 325 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 MPPED1O15442 326 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 IGLV2-23P01705 113 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 CLEC2LP0C7M8 214 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 DUTP33316 252 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 INSL3P51460 131 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 ARPC4P59998 168 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 TIMM50Q3ZCQ8 353 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 TMEM177Q53S58 311 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 KCTD9Q7L273 389 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 ZNF645Q8N7E2 425 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 POC5Q8NA72 575 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 OR5T1Q8NG75 326 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 MRPS7Q9Y2R9 242 aaKnown RBP15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 OR2W1Q9Y3N9 320 aa15.38■□□□□ 0.05
SHROOM1-204ENST00000440118 IGHV4OR15-8A0A075B7B6 117 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 A0A087WW49 117 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 ARPC1BO15143 372 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 CREBL2O60519 120 aaPredicted RBP15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 TUSC2O75896 110 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 SCAND1P57086 179 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 PJVKQ0ZLH3 352 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 TNXAQ16473 311 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 CNIH2Q6PI25 160 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 ACOT12Q8WYK0 555 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 B9D2Q9BPU9 175 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 COA4Q9NYJ1 87 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 ANXA10Q9UJ72 324 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 PRELID3BQ9Y3B1 194 aa15.37■□□□□ 0.05
SHROOM1-204ENST00000440118 TRAV18A0A075B6X5 111 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 H3BUA1 57 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 FCGR3BO75015 233 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 SLC22A5O76082 557 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 ACTL6BO94805 426 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 HSPB1P04792 205 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 OR2B11Q5JQS5 317 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 ZNF429Q86V71 674 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 OR5H6Q8NGV6 325 aa15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 OSR1Q8TAX0 266 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-204ENST00000440118 A0A0G2JLM5 398 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 LINC00473A8K010 186 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 APELAP0DMC3 54 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 UBE2KP61086 200 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 VAX1Q5SQQ9 334 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 IDO2Q6ZQW0 420 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 DLX4Q92988 240 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 TMEM68Q96MH6 324 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 DIABLOQ9NR28 239 aa15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 RBMX2Q9Y388 322 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-204ENST00000440118 TNCP24821 2201 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 DPPA5A6NC42 116 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 SSX5O60225 188 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 C11orf87Q6NUJ2 197 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 TEX45Q8NA69 505 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 BEST4Q8NFU0 473 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 DDB2Q92466 427 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 SLC25A38Q96DW6 304 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 COL7A1Q02388 2944 aa15.34■□□□□ 0.05
SHROOM1-204ENST00000440118 A0A0A6YYH2 397 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 A6NJ64 397 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 SRRM4A7MD48 611 aaKnown RBP15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 AIREO43918 545 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 HLA-DQB1P01920 261 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 CRYGBP07316 175 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 PRSS8Q16651 343 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 CROCCP3Q8IVE0 287 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 OR4S2Q8NH73 311 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 DGCR14Q96DF8 476 aaKnown RBP15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 OR4C12Q96R67 309 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 SPATA2Q9UM82 520 aa15.33■□□□□ 0.04
SHROOM1-204ENST00000440118 ANKRD34BA5PLL1 514 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms