RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TANC2Q9HCD6 1990 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 C1QL1O75973 258 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 CLLU1Q5K131 121 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 ZNF525Q8N782 197 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 IL22RA2Q969J5 263 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 B3GALNT1O75752 331 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 P2RY1P47900 373 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 RUNX1Q01196 453 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 RAB39BQ96DA2 213 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 TMEM204Q9BSN7 226 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
CPSF7-205ENST00000439958 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-205ENST00000439958 ITGB1BP2Q9UKP3 347 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 A6NNC1 897 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 NDUFA2O43678 99 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 PPOXP50336 477 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 UBE2KP61086 200 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 NRGNQ92686 78 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 CYTL1Q9NRR1 136 aa12.36□□□□□ -0.43
CPSF7-205ENST00000439958 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 MYOD1P15172 320 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 ID3Q02535 119 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 MEF2CQ06413 473 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 HEYLQ9NQ87 328 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 ANKRD34BA5PLL1 514 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 JTBO76095 146 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 IFNA10P01566 189 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
CPSF7-205ENST00000439958 RBKSQ9H477 322 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 DSCAML1Q8TD84 2053 aa12.35□□□□□ -0.43
CPSF7-205ENST00000439958 DANCRP0C864 163 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 CGB3P0DN86 165 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 CGB7P0DN87 165 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 LCN2P80188 198 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 ZNF383Q8NA42 475 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 NEIL1Q96FI4 390 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 CLCC1Q96S66 551 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 OR9G9P0C7N8 305 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 TNFRSF9Q07011 255 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 LSM10Q969L4 123 aaKnown RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 CELSR2Q9HCU4 2923 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 PIGBOS1A0A0B4J2F0 54 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 LEUTXA8MZ59 168 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 APELAP0DMC3 54 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 NQO2P16083 231 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 FHITP49789 147 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
CPSF7-205ENST00000439958 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 LYRM2Q9NU23 88 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-205ENST00000439958 GPR37O15354 613 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 HPRT1P00492 218 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 APOA2P02652 100 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 ARHGDIBP52566 201 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 GPR157Q5UAW9 335 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 MOB3BQ86TA1 216 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 DTD1Q8TEA8 209 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.43
CPSF7-205ENST00000439958 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
CPSF7-205ENST00000439958 ANKRD17O75179 2603 aaKnown RBP12.33□□□□□ -0.44
CPSF7-205ENST00000439958 EIF3GO75821 320 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF7-205ENST00000439958 PNKDQ8N490 385 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 OR1S2Q8NGQ3 325 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 TMEM231Q9H6L2 316 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 TAAR5O14804 337 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 IGHV2-70P01814 119 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 IGHV1-8P0DP01 117 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 OR13D1Q8NGV5 346 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-205ENST00000439958 HARBI1Q96MB7 349 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 PCGF1Q9BSM1 259 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 HILPDAQ9Y5L2 63 aa12.33□□□□□ -0.44
CPSF7-205ENST00000439958 CSMD2Q7Z408 3487 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 WNT2P09544 360 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 COL8A1P27658 744 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 PAX5Q02548 391 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 RNF141Q8WVD5 230 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 IFNA5P01569 189 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 LYL1P12980 280 aa12.32□□□□□ -0.44
CPSF7-205ENST00000439958 CAMLGP49069 296 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms