RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 DRAXINQ8NBI3 349 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 TMEM186Q96B77 213 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 WDR89Q96FK6 387 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 NMES1Q9C002 83 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 LPAR2Q9HBW0 351 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 SIRT7Q9NRC8 400 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 MMP26Q9NRE1 261 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 AMMECR1Q9Y4X0 333 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 G3V3Q6 166 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 RAMP3O60896 148 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 IGLV1-47P01700 117 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 LPAR6P43657 344 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 DVL1P1P54792 670 aaPredicted RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 LINC00205P59089 165 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF816Q0VGE8 651 aaPredicted RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 VMO1Q7Z5L0 202 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 PNKDQ8N490 385 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF383Q8NA42 475 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 OR11H6Q8NGC7 330 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 CD300LFQ8TDQ1 290 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 DDB2Q92466 427 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 SEC22AQ96IW7 307 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 OR10C1Q96KK4 312 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 C2orf50Q96LR7 162 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 SPIN2AQ99865 258 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 SPIN2BQ9BPZ2 258 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 RANBP3Q9H6Z4 567 aaPredicted RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 HEXA-AS1Q9H8Q6 139 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 UNKLQ9H9P5 680 aaKnown RBP9.15□□□□□ -0.94
LINC00539-203ENST00000434601 COMMD9Q9P000 198 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 PRELID3BQ9Y3B1 194 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
LINC00539-203ENST00000434601 TCF21O43680 179 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 FCGR3BO75015 233 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 TOX4O94842 621 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 S1PR2O95136 353 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 CT45A6P0DMU7 189 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 CT45A5P0DMU8 189 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 CT45A7P0DMV0 189 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 MMP9P14780 707 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 VDAC1P21796 283 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 AKR1C2P52895 323 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 BRWD1-AS2P59051 145 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 KLRD1Q13241 179 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
LINC00539-203ENST00000434601 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 HCP5Q6MZN7 132 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 NOXA1Q86UR1 476 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 ZBTB8BQ8NAP8 495 aaPredicted RBP9.14□□□□□ -0.95
LINC00539-203ENST00000434601 OR4P4Q8NGL7 312 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 OR4S2Q8NH73 311 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
LINC00539-203ENST00000434601 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 ANK2Q01484 3957 aa9.14□□□□□ -0.95
LINC00539-203ENST00000434601 TRAV14DV4A0A0A6YYC5 116 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 TXNL1O43396 289 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 ATG12O94817 140 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 HPRT1P00492 218 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 APOA2P02652 100 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 ARG1P05089 322 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 MSMBP08118 114 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 REG1BP48304 166 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 NKX2-5P52952 324 aaPredicted RBP9.13□□□□□ -0.95
LINC00539-203ENST00000434601 FGL1Q08830 312 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 RTL8BQ17RB0 113 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 THOC7Q6I9Y2 204 aaKnown RBP9.13□□□□□ -0.95
LINC00539-203ENST00000434601 IL17RELQ6ZVW7 336 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 TGIF2LXQ8IUE1 241 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 PPP1R1CQ8WVI7 109 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 C1orf159Q96HA4 380 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 HYLS1Q96M11 299 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 TBX15Q96SF7 602 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 PCGF1Q9BSM1 259 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 PLEKHA2Q9HB19 425 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 SLC35D1Q9NTN3 355 aa9.13□□□□□ -0.95
LINC00539-203ENST00000434601 B4DSR2 109 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 RNASEK-C17orf49H0YIS7 233 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 H0YJW9 148 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 SLC25A6P12236 298 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 EPHA1P21709 976 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 SRP14P37108 136 aaKnown RBP9.12□□□□□ -0.95
LINC00539-203ENST00000434601 TAGLNQ01995 201 aaKnown RBP9.12□□□□□ -0.95
LINC00539-203ENST00000434601 PAX8Q06710 450 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 IL15RAQ13261 267 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 Q5BKY6 102 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 DHRS7BQ6IAN0 325 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms