RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 OR10J5Q8NHC4 309 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 UFD1Q92890 307 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 CABLES2Q9BTV7 478 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 RETNQ9HD89 108 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
PRKDC-203ENST00000432581 LSM2Q9Y333 95 aaKnown RBP11.28□□□□□ -0.6
PRKDC-203ENST00000432581 ERICH4A6NGS2 130 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 SRRM4A7MD48 611 aaKnown RBP11.27□□□□□ -0.61
PRKDC-203ENST00000432581 BET1O15155 118 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 ARL6IP5O75915 188 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 CD3GP09693 182 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 UBE2KP61086 200 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 RHOGP84095 191 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 TPBGQ13641 420 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 MED22Q15528 200 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 PRSS8Q16651 343 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 GFI1Q99684 422 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
PRKDC-203ENST00000432581 TRBV6-7A0A0A0MS04 114 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 BMPR1BO00238 502 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 MPPED1O15442 326 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 RBMXL2O75526 392 aaKnown RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 TUSC2O75896 110 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 APELAP0DMC3 54 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 EXOSC2Q13868 293 aaKnown RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 TRAM1Q15629 374 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 TNXAQ16473 311 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 IGSF11Q5DX21 431 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 TMEM203Q969S6 136 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 FAM3DQ96BQ1 224 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
PRKDC-203ENST00000432581 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 AK6Q9Y3D8 172 aaKnown RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
PRKDC-203ENST00000432581 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
PRKDC-203ENST00000432581 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 PTGES3LE9PB15 166 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 EBAG9O00559 213 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
PRKDC-203ENST00000432581 ACTL6BO94805 426 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 FCGR3AP08637 254 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
PRKDC-203ENST00000432581 C2orf76Q3KRA6 126 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
PRKDC-203ENST00000432581 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
PRKDC-203ENST00000432581 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 SPIN2AQ99865 258 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 SPIN2BQ9BPZ2 258 aa11.25□□□□□ -0.61
PRKDC-203ENST00000432581 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 CRYZL1O95825 349 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 DUTP33316 252 aaKnown RBP11.24□□□□□ -0.61
PRKDC-203ENST00000432581 PSMD7P51665 324 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 CLDN12P56749 244 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 RCN1Q15293 331 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 DDB2Q92466 427 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 GINS4Q9BRT9 223 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
PRKDC-203ENST00000432581 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
PRKDC-203ENST00000432581 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 PRH1P02810 166 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 CD7P09564 240 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 CALRP27797 417 aaKnown RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 ZNF45Q02386 682 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 IRF3Q14653 427 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 OGFRL1Q5TC84 451 aaPredicted RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 IDO2Q6ZQW0 420 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 SLC25A42Q86VD7 318 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 VCXQ9H320 206 aa11.23□□□□□ -0.61
PRKDC-203ENST00000432581 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
PRKDC-203ENST00000432581 ZC4H2Q9NQZ6 224 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms