RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 FAM90A26D6RGX4 464 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 M0R036 132 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 YPEL1O60688 119 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 OR4A8P0C604 315 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 TLE1Q04724 770 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 PBDC1Q9BVG4 233 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
RFTN1-203ENST00000432519 CRYBA1P05813 215 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 MSMO1Q15800 293 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 TMEM108Q6UXF1 575 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 LFNGQ8NES3 379 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 CLDND2Q8NHS1 167 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
RFTN1-203ENST00000432519 K7ENP7 123 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 RAB29O14966 203 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
RFTN1-203ENST00000432519 ARG1P05089 322 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 HBG1P69891 147 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 HBG2P69892 147 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
RFTN1-203ENST00000432519 SDSLQ96GA7 329 aa12.1□□□□□ -0.47
RFTN1-203ENST00000432519 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
RFTN1-203ENST00000432519 SRP19P09132 144 aaKnown RBP12.09□□□□□ -0.47
RFTN1-203ENST00000432519 RPS23P62266 143 aaKnown RBP12.09□□□□□ -0.47
RFTN1-203ENST00000432519 TFF3Q07654 80 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 ZFP82Q8N141 532 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 PPP1R35Q8TAP8 253 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
RFTN1-203ENST00000432519 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 CSMD1Q96PZ7 3565 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 A0A1B0GW64 132 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 SELENOVP59797 346 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 RAB2AP61019 212 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 ZNF561Q8N587 486 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 GNG13Q9P2W3 67 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 ZNF835Q9Y2P0 537 aa12.09□□□□□ -0.47
RFTN1-203ENST00000432519 SAA2-SAA4A0A096LPE2 208 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 KBTBD11-OT1A0A1B0GTJ5 212 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 A0A1W2PPE2 198 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 H7C2Y5 167 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 SAA2P0DJI9 122 aaPredicted RBP12.08□□□□□ -0.48
RFTN1-203ENST00000432519 GNG10P50151 68 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 TLE4Q04727 773 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 SOHLH1Q5JUK2 328 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 RPP25LQ8N5L8 163 aaKnown RBP12.08□□□□□ -0.48
RFTN1-203ENST00000432519 C2CD4CQ8TF44 421 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 WFIKKN1Q96NZ8 548 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 ASH1LQ9NR48 2969 aaKnown RBP12.08□□□□□ -0.48
RFTN1-203ENST00000432519 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 TMPRSS2O15393 492 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 SEBOXQ9HB31 216 aaPredicted RBP12.08□□□□□ -0.48
RFTN1-203ENST00000432519 OR6C3Q9NZP0 311 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.48
RFTN1-203ENST00000432519 C15orf62A8K5M9 175 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 MYOD1P15172 320 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 CTRB1P17538 263 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 COL8A2P25067 703 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 DDB2Q92466 427 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 GFOD1Q9NXC2 390 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 PTAFRP25105 342 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 PRAMEF5Q5TYX0 476 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 FAM122CQ6P4D5 195 aa12.07□□□□□ -0.48
RFTN1-203ENST00000432519 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
RFTN1-203ENST00000432519 C17orf100A8MU93 164 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
RFTN1-203ENST00000432519 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 HRNRQ86YZ3 2850 aaPredicted RBP12.06□□□□□ -0.48
RFTN1-203ENST00000432519 HPRT1P00492 218 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 IFNA17P01571 189 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 LYG1Q8N1E2 194 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF383Q8NA42 475 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 SAV1Q9H4B6 383 aaPredicted RBP12.06□□□□□ -0.48
RFTN1-203ENST00000432519 ELOVL5Q9NYP7 299 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 MLXQ9UH92 298 aa12.06□□□□□ -0.48
RFTN1-203ENST00000432519 BTBD17A6NE02 478 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
RFTN1-203ENST00000432519 H3BQ15 152 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms