RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CDC42BPGQ6DT37 1551 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CDK5RAP2Q96SN8 1893 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 RPL36A-HNRNPH2H7BZ11 118 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CDX4O14627 284 aaPredicted RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 TAPBPO15533 448 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 C1orf105O95561 183 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 IGHA1P01876 353 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 HLA-DPB1P04440 258 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 FOLR1P15328 257 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 HGFACQ04756 655 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 WFDC2Q14508 124 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 IER5LQ5T953 404 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF534Q76KX8 674 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 KIR3DL3Q8N743 410 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 NT5CQ8TCD5 201 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 NABP1Q96AH0 204 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 DNAJC19Q96DA6 116 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 OR10A2Q9H208 303 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CDH20Q9HBT6 801 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CPSF4O95639 269 aaKnown RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 TRACP01848 142 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 BLVRBP30043 206 aaPredicted RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CCL23P55773 120 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 CD164Q04900 197 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 PRDX1Q06830 199 aaKnown RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 ZNF146Q15072 292 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 DUSP5Q16690 384 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 Q6ZSR3 168 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 MED12LQ86YW9 2145 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 LY6G5BQ8NDX9 201 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 RTP4Q96DX8 246 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 MRPL20Q9BYC9 149 aaKnown RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 TNFRSF12AQ9NP84 129 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 MRPL27Q9P0M9 148 aaKnown RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 VSIG4Q9Y279 399 aa4.53□□□□□ -1.68
PTPN4-203ENST00000430976 COA3Q9Y2R0 106 aaPredicted RBP4.53□□□□□ -1.68
PTPN4-203ENST00000430976 PLCE1Q9P212 2302 aa4.53□□□□□ -1.69
PTPN4-203ENST00000430976 ARHGAP5Q13017 1502 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 DPM2O94777 84 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 OR2A4O95047 310 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PPP1CCP36873 323 aaKnown RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 RPL11P62913 178 aaKnown RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 SAMD5Q5TGI4 173 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 FKBP1CQ5VVH2 108 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 SLC22A24Q8N4F4 322 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 DEFB125Q8N687 156 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 APCDD1LQ8NCL9 501 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 OR2A7Q96R45 310 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 NAA60Q9H7X0 242 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 NUDT4Q9NZJ9 180 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 KCNE3Q9Y6H6 103 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 ARRDC5A6NEK1 342 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 FAM220BPB1ANY3 271 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF253O75346 499 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 CRLF1O75462 422 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 GHRHP01286 108 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 SLC25A4P12235 298 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PIPP12273 146 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 LIFP15018 202 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 CDAP32320 146 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 HLA-DRB3P79483 266 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PMCHL1Q16048 86 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 TIFABQ6ZNK6 161 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 NEGR1Q7Z3B1 354 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 ADAT3Q96EY9 351 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 VN1R3Q9BXE9 311 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 TTTY10Q9BZA0 68 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PLEKHF2Q9H8W4 249 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 MRPL17Q9NRX2 175 aaKnown RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 TRMT112Q9UI30 125 aaKnown RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PXMP4Q9Y6I8 212 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PRR36Q9H6K5 1346 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 PIK3C2BO00750 1634 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 A0A1B0GTI1 187 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 LMO7DNF2Z398 122 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 H3BSH0 61 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 CDC42EP2O14613 210 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 TIMP1P01033 207 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 BTCP35070 178 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 LPAR6P43657 344 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 FXYD6P3P58550 94 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 FUT5Q11128 374 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF658BQ4V348 819 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 AHDC1Q5TGY3 1603 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 CARD19Q96LW7 228 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 MANBALQ9NQG1 85 aa4.52□□□□□ -1.69
PTPN4-203ENST00000430976 KLF13Q9Y2Y9 288 aaPredicted RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 RPL36Q9Y3U8 105 aaKnown RBP4.52□□□□□ -1.69
PTPN4-203ENST00000430976 LRP6O75581 1613 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 GPATCH8Q9UKJ3 1502 aaKnown RBP4.51□□□□□ -1.69
PTPN4-203ENST00000430976 EDIL3O43854 480 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 GPR137BO60478 399 aa4.51□□□□□ -1.69
PTPN4-203ENST00000430976 SUB1P53999 127 aaKnown RBP eCLIP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms