RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 C17orf100A8MU93 164 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 M0R1X1 148 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 FCGR3BO75015 233 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 ARG1P05089 322 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 CTRB1P17538 263 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 RAB7AP51149 207 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 FLI1Q01543 452 aaPredicted RBP11.51□□□□□ -0.57
HOXC4-202ENST00000430889 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 SLC25A24Q6NUK1 477 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 PLPPR2Q96GM1 343 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
HOXC4-202ENST00000430889 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF665Q9H7R5 613 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 RAB9BQ9NP90 201 aa11.51□□□□□ -0.57
HOXC4-202ENST00000430889 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 LOC102723971A0A1B0GUV8 181 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 KIR2DS2P43631 304 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 GNB2P62879 340 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 TMEM30BQ3MIR4 351 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 OR10G4Q8NGN3 311 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 CCL13Q99616 98 aa11.5□□□□□ -0.57
HOXC4-202ENST00000430889 TRGV10A0A0A0MS01 117 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF729A6NN14 1252 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-202ENST00000430889 FCN3O75636 299 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 GYPAP02724 150 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 OR4A8P0C604 315 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 FOLR2P14207 255 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 RHEBQ15382 184 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 HAGHQ16775 308 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 OR8G2PQ6IF36 304 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 C15orf54Q8N8G6 183 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
HOXC4-202ENST00000430889 IDI2-AS1Q9NZ38 188 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 MSRB2Q9Y3D2 182 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 SAA2-SAA4A0A096LPE2 208 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 H7C2Y5 167 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-202ENST00000430889 LY86O95711 162 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-202ENST00000430889 VDAC2P45880 294 aaPredicted RBP11.49□□□□□ -0.57
HOXC4-202ENST00000430889 RELBQ01201 579 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 Q8N7P7 452 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 CLCC1Q96S66 551 aa11.49□□□□□ -0.57
HOXC4-202ENST00000430889 MMP23AO75900 390 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 IGHV3-7P01780 117 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 AKR1C3P42330 323 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 SPCS3P61009 180 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 RAB2AP61019 212 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 ACSM6Q6P461 480 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 DMRTC2Q8IXT2 367 aaPredicted RBP11.48□□□□□ -0.57
HOXC4-202ENST00000430889 DEFB108BQ8NET1 73 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 YPEL4Q96NS1 127 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 CISD1Q9NZ45 108 aaKnown RBP11.48□□□□□ -0.57
HOXC4-202ENST00000430889 SH3BGRL2Q9UJC5 107 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
HOXC4-202ENST00000430889 PRELID3BQ9Y3B1 194 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
HOXC4-202ENST00000430889 PTPRQQ9UMZ3 2332 aa11.48□□□□□ -0.57
HOXC4-202ENST00000430889 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
HOXC4-202ENST00000430889 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 SHISA9B4DS77 424 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 SNRNP70P08621 437 aaKnown RBP11.47□□□□□ -0.57
HOXC4-202ENST00000430889 NQO2P16083 231 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 THBS3P49746 956 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 OR2B8PP59922 312 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 CCL8P80075 99 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF787Q6DD87 383 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
HOXC4-202ENST00000430889 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 ZNF383Q8NA42 475 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 OR10P1Q8NGE3 313 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 HIST1H2BAQ96A08 127 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 S1PR3Q99500 378 aa11.47□□□□□ -0.57
HOXC4-202ENST00000430889 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
HOXC4-202ENST00000430889 LINC00312Q9Y6C7 94 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms