RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ARRDC1-AS1Q9H2J1 176 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 HIPK2Q9H2X6 1198 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 DSCAMO60469 2012 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 RP1L1Q8IWN7 2480 aaPredicted RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 B4E171 279 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 DFFBO76075 338 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 SYNGR4O95473 234 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 HAND1O96004 215 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 HBZP02008 142 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 GZMBP10144 247 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 FGF7P21781 194 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 MPLP40238 635 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 TSPAN7P41732 249 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 PPP1CBP62140 327 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 MEF2BQ02080 365 aaPredicted RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 FOXC1Q12948 553 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 Q3ZCU0 254 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 NRN1LQ496H8 165 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 FAM201AQ5SY85 155 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 NCR3LG1Q68D85 454 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 OR4F5Q8NH21 305 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM37Q8WXS4 190 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 LSM10Q969L4 123 aaKnown RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 RAB24Q969Q5 203 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 S100PBPQ96BU1 408 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 OR4F4Q96R69 305 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 TCEAL7Q9BRU2 100 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 SMDT1Q9H4I9 107 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 PATZ1Q9HBE1 687 aaKnown RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 ZNRD1Q9P1U0 126 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 HSPB7Q9UBY9 170 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 VAX2Q9UIW0 290 aa5.98□□□□□ -1.45
COL28A1-202ENST00000430711 MRPS18CQ9Y3D5 142 aaKnown RBP5.98□□□□□ -1.45
COL28A1-202ENST00000430711 NPIPB11E5RHQ5 1161 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 RBFOX2O43251 390 aaKnown RBP eCLIP5.97□□□□□ -1.45
COL28A1-202ENST00000430711 CTXN2P0C2S0 81 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 OR4A8P0C604 315 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 ACP1P24666 158 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 GNB1P62873 340 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 TGFBR3Q03167 851 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 FFAR4Q5NUL3 377 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 VWA1Q6PCB0 445 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 DHRS13Q6UX07 377 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 C1orf210Q8IVY1 113 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 TMEM256Q8N2U0 113 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF664Q8N3J9 261 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 NPCDR1Q9BY65 106 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 SIRT7Q9NRC8 400 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 FUT9Q9Y231 359 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 MPC1Q9Y5U8 109 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 ROS1P08922 2347 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 TRBV24-1A0A075B6N3 115 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 IGHV3OR15-7A0A075B7D8 119 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 OR5B21A6NL26 309 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 LRRC30A6NM36 301 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 C15orf62A8K5M9 175 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 AHRRA9YTQ3 701 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 SLC31A2O15432 143 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 CER1O95813 267 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 HBE1P02100 147 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 SP1P08047 785 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 COX5BP10606 129 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 ZNF134P52741 427 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PLP2Q04941 152 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 FOXF2Q12947 444 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 EDDM3AQ14507 147 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 RPL39P5Q59GN2 51 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PRR31Q5SQ13 230 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 SPATA31B1PQ5VZV4 182 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 FBXW9Q5XUX1 488 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 ALKBH2Q6NS38 261 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 CYP2G1PQ6ZSU1 146 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 CD177Q8N6Q3 437 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 OR10G4Q8NGN3 311 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 OR10G9Q8NGN4 311 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 OR10G7Q8NGN6 311 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 MISP3Q96FF7 219 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PSMG3Q9BT73 122 aaPredicted RBP5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PKIBQ9C010 78 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 SLC39A9Q9NUM3 307 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PSG11Q9UQ72 335 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 WIPI2Q9Y4P8 454 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 PCNX2A6NKB5 2137 aa5.97□□□□□ -1.45
COL28A1-202ENST00000430711 RAI1Q7Z5J4 1906 aaPredicted RBP5.96□□□□□ -1.45
COL28A1-202ENST00000430711 F2Z2F3 143 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 AQP7O14520 342 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 EREGO14944 169 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 LAMTOR5O43504 91 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 KBTBD11O94819 623 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 GYPAP02724 150 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 SLC25A6P12236 298 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 CD82P27701 267 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 ARR3P36575 388 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 GALR1P47211 349 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 GABRA2P47869 451 aa5.96□□□□□ -1.46
COL28A1-202ENST00000430711 EDDM3BP56851 147 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms