RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 C9orf139Q6ZV77 190 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 CFHR4Q92496 578 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
LINC00887-203ENST00000429578 FAM96BQ9Y3D0 163 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 ALG5Q9Y673 324 aa13.75□□□□□ -0.21
LINC00887-203ENST00000429578 MXRA5Q9NR99 2828 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 TIMM23O14925 209 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 CREBL2O60519 120 aaPredicted RBP13.74□□□□□ -0.21
LINC00887-203ENST00000429578 FCGR3BO75015 233 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 FBP1P09467 338 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 RRASP10301 218 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 CBX3Q13185 183 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 RTL8BQ17RB0 113 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 PRIMA1Q86XR5 153 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 MITD1Q8WV92 249 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 MEGF9Q9H1U4 602 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 SLC35D1Q9NTN3 355 aa13.74□□□□□ -0.21
LINC00887-203ENST00000429578 CDS2O95674 445 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 SERPINE2P07093 398 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 HNF1AP20823 631 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 RAB13P51153 203 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 DHRS7BQ6IAN0 325 aaPredicted RBP13.73□□□□□ -0.21
LINC00887-203ENST00000429578 LIAT1Q6ZQX7 453 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 OR4S2Q8NH73 311 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 WASHC3Q9Y3C0 194 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 SOX21Q9Y651 276 aaPredicted RBP13.73□□□□□ -0.21
LINC00887-203ENST00000429578 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 H7C2Y5 167 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 RPA2P15927 270 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 CD1BP29016 333 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 SRPXP78539 464 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 ANKRD55Q3KP44 614 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 COQ8AQ8NI60 647 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 PHB2Q99623 299 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
LINC00887-203ENST00000429578 CRLF1O75462 422 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 HPRT1P00492 218 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 IGKV1-16P04430 117 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 BRS3P32247 399 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 LPAR6P43657 344 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 IL17RELQ6ZVW7 336 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 BCL6BQ8N143 479 aaPredicted RBP13.72□□□□□ -0.21
LINC00887-203ENST00000429578 LRTM2Q8N967 370 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 LHFPL5Q8TAF8 219 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 OR51J1Q9H342 316 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
LINC00887-203ENST00000429578 A0A0B4J2A0 478 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 VGLL3A8MV65 326 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 CRYZL1O95825 349 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
LINC00887-203ENST00000429578 DYNLT3P51808 116 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 LGI3Q8N145 548 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 C12orf45Q8N5I9 185 aaPredicted RBP13.71□□□□□ -0.21
LINC00887-203ENST00000429578 OR4C13Q8NGP0 309 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 C22orf15Q8WYQ4 148 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 IL22RA2Q969J5 263 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 FLYWCH2Q96CP2 140 aaKnown RBP13.71□□□□□ -0.21
LINC00887-203ENST00000429578 SHPKQ9UHJ6 478 aa13.71□□□□□ -0.21
LINC00887-203ENST00000429578 PIGBOS1A0A0B4J2F0 54 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 S1PR2O95136 353 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 VENTXO95231 258 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 ZNF695Q8IW36 515 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
LINC00887-203ENST00000429578 RBPMSQ93062 196 aaKnown RBP13.7□□□□□ -0.22
LINC00887-203ENST00000429578 RBMXL1Q96E39 390 aaKnown RBP13.7□□□□□ -0.22
LINC00887-203ENST00000429578 IGKV1D-33P01593 117 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 IGKV1-33P01594 117 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 IGKV1-39P01597 117 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 IGKV1D-39P04432 117 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 AANATQ16613 207 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 DEFB112Q30KQ8 113 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 SELENOHQ8IZQ5 122 aaKnown RBP13.7□□□□□ -0.22
LINC00887-203ENST00000429578 COMMD9Q9P000 198 aa13.7□□□□□ -0.22
LINC00887-203ENST00000429578 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 SSNA1O43805 119 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 SNRNP70P08621 437 aaKnown RBP13.69□□□□□ -0.22
LINC00887-203ENST00000429578 CD24P25063 80 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 EBI3Q14213 229 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 THNSL2Q86YJ6 484 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 SLC35G3Q8N808 338 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 DNHD1Q96M86 4753 aa13.69□□□□□ -0.22
LINC00887-203ENST00000429578 A0A1B0GVG6 124 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 DUXBA0A1W2PPF3 345 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 SHOXO15266 292 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 ATG12O94817 140 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 MOSP00540 346 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 HRASP01112 189 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 FAM106CPP0CH98 169 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 NQO2P16083 231 aa13.68□□□□□ -0.22
LINC00887-203ENST00000429578 LRRC75BQ2VPJ9 315 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms