RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PPIAL4DF5H284 164 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 H0Y980 276 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 BET1O15155 118 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 ST8SIA3O43173 380 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PGLYRP1O75594 196 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 HAND1O96004 215 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 GRPP07492 148 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 FGF2P09038 288 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PPIAL4FP0DN26 164 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 IGKV1-13P0DP09 117 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 MMP9P14780 707 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 RCC1P18754 421 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 VDAC1P21796 283 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 GATA3P23771 443 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 F2RP25116 425 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 P2RY1P47900 373 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 LUMP51884 338 aaPredicted RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PAX2Q02962 417 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 SP6Q3SY56 376 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PHLDA2Q53GA4 152 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 EIF5AL1Q6IS14 154 aaKnown RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF818PQ6ZRF7 136 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 TBC1D26Q86UD7 250 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 SELENOHQ8IZQ5 122 aaKnown RBP7.08□□□□□ -1.28
HDAC1-202ENST00000428704 BATF2Q8N1L9 274 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 OR5D13Q8NGL4 314 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 OR11L1Q8NGX0 322 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 LHFPL5Q8TAF8 219 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 PLPPR1Q8TBJ4 325 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 TP53RKQ96S44 253 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 C11orf1Q9H5F2 150 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 UFSP2Q9NUQ7 469 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 SDHAF2Q9NX18 166 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 NUP50Q9UKX7 468 aa7.08□□□□□ -1.28
HDAC1-202ENST00000428704 TMEM30CPA0ZSE6 113 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 OOEPA6NGQ2 149 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 MSGN1A6NI15 193 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 SRRM5B3KS81 715 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 KRBOX1C9JBD0 128 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 K7EPK0 472 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 FOXH1O75593 365 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 FCN3O75636 299 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 JTBO76095 146 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 LHBP01229 141 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 MBPP02686 304 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 CRYBA1P05813 215 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 RPL12P30050 165 aaKnown RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 CD80P33681 288 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ATXN7L3Q14CW9 347 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 THOC7Q6I9Y2 204 aaKnown RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 TRAT1Q6PIZ9 186 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 LYPD2Q6UXB3 125 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF826PQ6ZT77 177 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF695Q8IW36 515 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 BCL6BQ8N143 479 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 SLC35G3Q8N808 338 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 OR10V1Q8NGI7 309 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 SECTM1Q8WVN6 248 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ERGIC1Q969X5 290 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF48Q96MX3 618 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 ARV1Q9H2C2 271 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 CCL28Q9NRJ3 127 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 FAM212BQ9NTI7 297 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 CTSZQ9UBR2 303 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 TRAPPC2LQ9UL33 140 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 UBE2J1Q9Y385 318 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-202ENST00000428704 POMT1Q9Y6A1 747 aa7.07□□□□□ -1.28
HDAC1-202ENST00000428704 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 RAB19A4D1S5 217 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 LRRC30A6NM36 301 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 SIRPB1O00241 398 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 HSPB6O14558 160 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 TNFRSF13BO14836 293 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-202ENST00000428704 GPR137BO60478 399 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 PSPNO60542 156 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 PITX3O75364 302 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 IGLV2-14P01704 120 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 KRTAP10-3P60369 221 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 SMIM21Q3B7S5 101 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 TMEM268Q5VZI3 342 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 UQCC3Q6UW78 93 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 ZNF841Q6ZN19 808 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 C1orf87Q8N0U7 546 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 Q8N3U1 123 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 STPG2Q8N412 459 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 GCSAMQ8N6F7 178 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 TCTEX1D1Q8N7M0 179 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 UBAC2Q8NBM4 344 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 DMBX1Q8NFW5 382 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 PPP1R35Q8TAP8 253 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 LSM10Q969L4 123 aaKnown RBP7.06□□□□□ -1.28
HDAC1-202ENST00000428704 SAT2Q96F10 170 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-202ENST00000428704 NEIL1Q96FI4 390 aaPredicted RBP7.06□□□□□ -1.28
HDAC1-202ENST00000428704 CXorf58Q96LI9 332 aa7.06□□□□□ -1.28
HDAC1-202ENST00000428704 TAF9BQ9HBM6 251 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms