RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 EGR2P11161 476 aaPredicted RBP13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 CBX5P45973 191 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 GNB1P62873 340 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 C19orf54Q5BKX5 351 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 HOGA1Q86XE5 327 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 SAMD12Q8N8I0 201 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 GRPEL2Q8TAA5 225 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 DDB2Q92466 427 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 FUNDC2Q9BWH2 189 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 TPSG1Q9NRR2 321 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 PRELID3BQ9Y3B1 194 aa13.62□□□□□ -0.23
SLC6A1-202ENST00000425938 XRCC3O43542 346 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 TUSC2O75896 110 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 CRYZL1O95825 349 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 KIAA0141Q14154 515 aaPredicted RBP13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 TMEM69Q5SWH9 247 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 GVQW1Q8N7I0 195 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 LFNGQ8NES3 379 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 OR11H1Q8NG94 326 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 SLC25A46Q96AG3 418 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 KCTD12Q96CX2 325 aaKnown RBP13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 GNB4Q9HAV0 340 aa13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 MRPS7Q9Y2R9 242 aaKnown RBP13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 RBMX2Q9Y388 322 aaKnown RBP13.61□□□□□ -0.23
SLC6A1-202ENST00000425938 IGKV1D-13A0A0B4J2D9 117 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 LINC00473A8K010 186 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 SOX15O60248 233 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 CRYGBP07316 175 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 OR8U8P0C7N1 319 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 IGKV1-13P0DP09 117 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 HOXD3P31249 432 aaPredicted RBP13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 NCS1P62166 190 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 RUNX1Q01196 453 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 FHL3Q13643 280 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 KCTD9Q7L273 389 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 OR1N2Q8NGR9 330 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 OR5B12Q96R08 314 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 HSD17B10Q99714 261 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 DCUN1D5Q9BTE7 237 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 ZMAT5Q9UDW3 170 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-202ENST00000425938 SRRM4A7MD48 611 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 I3L521 148 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 ARPC1BO15143 372 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 FCGR3BO75015 233 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 FCGR2CP31995 323 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 UBE2KP61086 200 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 VBP1P61758 197 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 ZNF616Q08AN1 781 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 EGFEM1PQ0D2K5 195 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 TEX45Q8NA69 505 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 CASTOR1Q8WTX7 329 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 SLA2Q9H6Q3 261 aa13.59□□□□□ -0.23
SLC6A1-202ENST00000425938 CREBL2O60519 120 aaPredicted RBP13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 FCER2P06734 321 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 PTHLHP12272 177 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 AADACP22760 399 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 TPPP2P59282 170 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 TAS2R20P59543 309 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 PJVKQ0ZLH3 352 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 SECTM1Q8WVN6 248 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 ZNF355PQ9NSJ1 428 aa13.58□□□□□ -0.24
SLC6A1-202ENST00000425938 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 ACTL6BO94805 426 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 IGLV2-14P01704 120 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 KRTAP10-11P60412 298 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 CDK10Q15131 360 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 OR2B11Q5JQS5 317 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 ZNF66Q6ZN08 573 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 OVCH2Q7RTZ1 564 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 OR5AP2Q8NGF4 316 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 OR4S2Q8NH73 311 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 PHB2Q99623 299 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 TAS2R8Q9NYW2 309 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 COMMD3Q9UBI1 195 aa13.57□□□□□ -0.24
SLC6A1-202ENST00000425938 SORL1Q92673 2214 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 SMIM31A0A1B0GVY4 71 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 SEC14L6B5MCN3 397 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 H3BUA1 57 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 PPYP01298 95 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 TRGV3P03979 118 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 LGALS1P09382 135 aaKnown RBP13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 SSBP2P81877 361 aaPredicted RBP13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 MSMO1Q15800 293 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 PRSS8Q16651 343 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 IDO2Q6ZQW0 420 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 POC5Q8NA72 575 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 OR5T1Q8NG75 326 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
SLC6A1-202ENST00000425938 SNAPC3Q92966 411 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms