RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LIN7CQ9NUP9 197 aaKnown RBP19.43■□□□□ 0.7
VEGFA-209ENST00000425836 PRELID3BQ9Y3B1 194 aa19.43■□□□□ 0.7
VEGFA-209ENST00000425836 RNF114Q9Y508 228 aa19.43■□□□□ 0.7
VEGFA-209ENST00000425836 COL6A5A8TX70 2615 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 GPR31O00270 319 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 FCGR3BO75015 233 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 NDUFA3O95167 84 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 TMEM177Q53S58 311 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 C9orf152Q5JTZ5 239 aa19.42■□□□□ 0.7
VEGFA-209ENST00000425836 PGLYRP1O75594 196 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-209ENST00000425836 AP3S2P59780 193 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 CBX3Q13185 183 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 OR2B11Q5JQS5 317 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 C12orf54Q6X4T0 127 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 SLC38A6Q8IZM9 456 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 SERTAD4Q9NUC0 356 aa19.41■□□□□ 0.7
VEGFA-209ENST00000425836 CRYZL1O95825 349 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 LGALS7P47929 136 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 PSG5Q15238 335 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 C5orf64Q2M2E5 130 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 TMEM95Q3KNT9 176 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 CMTM1Q8IZ96 169 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 OR51S1Q8NGJ8 323 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 MRGPRFQ96AM1 343 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 TSNAXQ99598 290 aaKnown RBP19.4■□□□□ 0.7
VEGFA-209ENST00000425836 KIAA1456Q9P272 454 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 SRRM4A7MD48 611 aaKnown RBP19.4■□□□□ 0.7
VEGFA-209ENST00000425836 RRHO14718 337 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 IGLV2-23P01705 113 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 PGAM2P15259 253 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 PPP5CP53041 499 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 PROK1P58294 105 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 PHLDA2Q53GA4 152 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 OR51H1Q8NH63 302 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 HARBI1Q96MB7 349 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 FBXL15Q9H469 300 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 HRASLSQ9HDD0 168 aa19.4■□□□□ 0.7
VEGFA-209ENST00000425836 SHOXO15266 292 aa19.39■□□□□ 0.69
VEGFA-209ENST00000425836 CATR1Q13166 79 aa19.39■□□□□ 0.69
VEGFA-209ENST00000425836 ARSJQ5FYB0 599 aaPredicted RBP19.39■□□□□ 0.69
VEGFA-209ENST00000425836 PRRT1Q99946 306 aa19.39■□□□□ 0.69
VEGFA-209ENST00000425836 MCUBQ9NWR8 336 aa19.39■□□□□ 0.69
VEGFA-209ENST00000425836 SLC2A8Q9NY64 477 aa19.39■□□□□ 0.69
VEGFA-209ENST00000425836 RLN1P04808 185 aa19.38■□□□□ 0.69
VEGFA-209ENST00000425836 KIR2DS2P43631 304 aa19.38■□□□□ 0.69
VEGFA-209ENST00000425836 VDAC2P45880 294 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-209ENST00000425836 TRIQKQ629K1 86 aa19.38■□□□□ 0.69
VEGFA-209ENST00000425836 OSR1Q8TAX0 266 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-209ENST00000425836 METTL1Q9UBP6 276 aaKnown RBP19.38■□□□□ 0.69
VEGFA-209ENST00000425836 LINC01548A6NM66 108 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 HAX1O00165 279 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 SPDEFO95238 335 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 IGHG2P01859 326 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 PI3P19957 117 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 FAUP35544 74 aaKnown RBP19.37■□□□□ 0.69
VEGFA-209ENST00000425836 ZNF57Q68EA5 555 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-209ENST00000425836 LIN54Q6MZP7 749 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 SPAG16Q8N0X2 631 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 OR13C8Q8NGS7 320 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 OR4S2Q8NH73 311 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 MARCH1Q8TCQ1 289 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 DEDD2Q8WXF8 326 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 S100ZQ8WXG8 99 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 HSPB9Q9BQS6 159 aa19.37■□□□□ 0.69
VEGFA-209ENST00000425836 RAMP3O60896 148 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 IDO2Q6ZQW0 420 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 SPATA3Q8NHX4 192 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 ZNF486Q96H40 463 aaPredicted RBP19.36■□□□□ 0.69
VEGFA-209ENST00000425836 SLC2A9Q9NRM0 540 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 SCP2D1Q9UJQ7 156 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 SLC25A17O43808 307 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 HLA-DRB1P01911 266 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 CRYGBP07316 175 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 IL7P13232 177 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 INPP1P49441 399 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 PLGLAQ15195 96 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 SLC35E3Q7Z769 313 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 ZFAND1Q8TCF1 268 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 WFDC12Q8WWY7 111 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 WNT10AQ9GZT5 417 aa19.36■□□□□ 0.69
VEGFA-209ENST00000425836 FCN1O00602 326 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 RBFOX2O43251 390 aaKnown RBP eCLIP19.35■□□□□ 0.695e-9■□□□□ 10.6
VEGFA-209ENST00000425836 VSIG10L2P0DP72 767 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 S100GP29377 79 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 ECI1P42126 302 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 TBC1D26Q86UD7 250 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 C3orf56Q8N813 242 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 POC5Q8NA72 575 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 TPSG1Q9NRR2 321 aa19.35■□□□□ 0.69
VEGFA-209ENST00000425836 CTSDP07339 412 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-209ENST00000425836 PIGPP57054 158 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 KRTAP10-3P60369 221 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 UBE2KP61086 200 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 RND3P61587 244 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 SURF2Q15527 256 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-209ENST00000425836 KLHDC1Q8N7A1 406 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 CLCC1Q96S66 551 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 ZNF747Q9BV97 191 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 GPR132Q9UNW8 380 aa19.34■□□□□ 0.69
VEGFA-209ENST00000425836 IGHV7-81A0A0B4J1V7 117 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms