RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 QTRT1Q9BXR0 403 aaKnown RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 PATZ1Q9HBE1 687 aaKnown RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 POLDIP2Q9Y2S7 368 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 OR9G9P0C7N8 305 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 HNF1AP20823 631 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 IL3RAP26951 378 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 HOXA6P31267 233 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 EDDM3BP56851 147 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 TBC1D28Q2M2D7 210 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 TGIF2LYQ8IUE0 185 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 VKORC1L1Q8N0U8 176 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 OR6C3Q9NZP0 311 aa11.84□□□□□ -0.51
TPM3P9-201ENST00000424846 CADP27708 2225 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 TRBV20OR9-2A0A075B6H5 130 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 PROP1O75360 226 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 NDUFB4O95168 129 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 CD33P20138 364 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 COX5AP20674 150 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 TCF23Q7RTU1 214 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 FAM234AQ9H0X4 552 aa11.83□□□□□ -0.51
TPM3P9-201ENST00000424846 SVILO95425 2214 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 TMEM30CPA0ZSE6 113 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 SLC31A2O15432 143 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 AGFG2O95081 481 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 RAC2P15153 192 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 CD82P27701 267 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 LINC01551Q86U37 167 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 PSG11Q9UQ72 335 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 ICE1Q9Y2F5 2266 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 RNF212BA8MTL3 300 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 EREGO14944 169 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 IFNA10P01566 189 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 MSMO1Q15800 293 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 UTF1Q5T230 341 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 H2BFWTQ7Z2G1 175 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 OBP2BQ9NPH6 170 aa11.83□□□□□ -0.52
TPM3P9-201ENST00000424846 PIGBOS1A0A0B4J2F0 54 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 SP1P08047 785 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 IGHV1-2P23083 117 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 ACP1P24666 158 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 PDLIM4P50479 330 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 Q8IYB0 196 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 Q8TCH9 128 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 SDSLQ96GA7 329 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 KLF14Q8TD94 323 aaPredicted RBP11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 MSL2Q9HCI7 577 aa11.82□□□□□ -0.52
TPM3P9-201ENST00000424846 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 CLDN14O95500 239 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 FOXF2Q12947 444 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 VWC2Q2TAL6 325 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 LRP11Q86VZ4 500 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 ZNF709Q8N972 641 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 HES4Q9HCC6 221 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 TRAV3A0A0B4J244 114 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 A0A0U1RQK1 487 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 RRHO14718 337 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 LAMTOR5O43504 91 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 SLC10A1Q14973 349 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 MRPL37Q9BZE1 423 aaKnown RBP11.81□□□□□ -0.52
TPM3P9-201ENST00000424846 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 TAS2R60P59551 318 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 USF2Q15853 346 aaPredicted RBP11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 TGIF2LXQ8IUE1 241 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 RAB29O14966 203 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 GCH1P30793 250 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 EDDM3AQ14507 147 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 DDA1Q9BW61 102 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 OOEPA6NGQ2 149 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 IQCF6A8MYZ5 107 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 MBP02144 154 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 FRMD6-AS1P0C7T7 363 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 THBS3P49746 956 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 CATR1Q13166 79 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 NANOS1Q8WY41 292 aaKnown RBP11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
TPM3P9-201ENST00000424846 AQP7O14520 342 aa11.79□□□□□ -0.52
TPM3P9-201ENST00000424846 TYMSP04818 313 aa11.79□□□□□ -0.52
TPM3P9-201ENST00000424846 CD1BP29016 333 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms