RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TOLLIPQ9H0E2 274 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 OR2W1Q9Y3N9 320 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
VRK3-203ENST00000424804 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 SMIM31A0A1B0GVY4 71 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 SLC25A17O43808 307 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 HPGDSO60760 199 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 GABARAPO95166 117 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 NDUFA3O95167 84 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 NHLRC4P0CG21 123 aaPredicted RBP10.07□□□□□ -0.8
VRK3-203ENST00000424804 FXYD4P59646 89 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 GNB1P62873 340 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 PSG5Q15238 335 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 RTL8BQ17RB0 113 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 OR2B11Q5JQS5 317 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 CXorf66Q5JRM2 361 aaPredicted RBP10.07□□□□□ -0.8
VRK3-203ENST00000424804 HOGA1Q86XE5 327 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
VRK3-203ENST00000424804 HARBI1Q96MB7 349 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 DCUN1D5Q9BTE7 237 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 OR51J1Q9H342 316 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 GNB4Q9HAV0 340 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 CSMD3Q7Z407 3707 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
VRK3-203ENST00000424804 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 G3V318 75 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 FCN1O00602 326 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 SHOXO15266 292 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 CA2P00918 260 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 IGLV1-40P01703 118 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 FCGR2CP31995 323 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 PRSS3P35030 304 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 CBX5P45973 191 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 RAB25P57735 213 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 RUNX1Q01196 453 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 CTF1Q16619 201 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
VRK3-203ENST00000424804 C9orf66Q5T8R8 295 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 MZT2AQ6P582 158 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 SNX29P2Q8IUI4 249 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 ZNF491Q8N8L2 437 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 SECTM1Q8WVN6 248 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
VRK3-203ENST00000424804 TPSG1Q9NRR2 321 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 U3KQK5 164 aa10.06□□□□□ -0.8
VRK3-203ENST00000424804 A0A1W2PN81 502 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 LINC00473A8K010 186 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 TNFSF12O43508 249 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 CNIH1O95406 144 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 CRYZL1O95825 349 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 HLA-DQB1P01920 261 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 PMP2P02689 132 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 OR5H8P0DN80 308 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 ELK1P19419 428 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 AADACP22760 399 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 DUTP33316 252 aaKnown RBP10.05□□□□□ -0.8
VRK3-203ENST00000424804 CHRNA7P36544 502 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 ALDH3B2P48448 385 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 CX3CL1P78423 397 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 NDPQ00604 133 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 TMEM65Q6PI78 240 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 TMEM17Q86X19 198 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 GRPEL2Q8TAA5 225 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 TCTEX1D2Q8WW35 142 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 AP3S1Q92572 193 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 TAS2R8Q9NYW2 309 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 EHFQ9NZC4 300 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 ZMAT5Q9UDW3 170 aaKnown RBP10.05□□□□□ -0.8
VRK3-203ENST00000424804 GAB2Q9UQC2 676 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 FBXO7Q9Y3I1 522 aa10.05□□□□□ -0.8
VRK3-203ENST00000424804 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 SOX15O60248 233 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
VRK3-203ENST00000424804 FCGR3BO75015 233 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 SPDEFO95238 335 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 APOA1P02647 267 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 RRASP10301 218 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 EGR2P11161 476 aaPredicted RBP10.04□□□□□ -0.8
VRK3-203ENST00000424804 ZNF182P17025 639 aaPredicted RBP10.04□□□□□ -0.8
VRK3-203ENST00000424804 ECI1P42126 302 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 DCTN2Q13561 401 aaKnown RBP10.04□□□□□ -0.8
VRK3-203ENST00000424804 CDK10Q15131 360 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 MINDY2Q8NBR6 621 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 OR5AP2Q8NGF4 316 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 SNAPC3Q92966 411 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 ADTRPQ96IZ2 230 aa10.04□□□□□ -0.8
VRK3-203ENST00000424804 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms