RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 PRSS22Q9GZN4 317 aa13.54□□□□□ -0.24
FOXN4-203ENST00000423960 RANBP3Q9H6Z4 567 aaPredicted RBP13.54□□□□□ -0.24
FOXN4-203ENST00000423960 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
FOXN4-203ENST00000423960 TMEM89A2RUT3 159 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 FGF16O43320 207 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 FCGR3BO75015 233 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 AMY1AP04745 511 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 CD40LGP29965 261 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 RAG2P55895 527 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 MMDQ15546 238 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 ABCA11PQ4W5N1 156 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 PHLDA2Q53GA4 152 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 IDO2Q6ZQW0 420 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 C5orf56Q8N8D9 126 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 Q8N9W7 124 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 NPBQ8NG41 125 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 OR4F5Q8NH21 305 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 CCDC32Q9BV29 185 aa13.53□□□□□ -0.24
FOXN4-203ENST00000423960 NBR2O15453 112 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 PEX14O75381 377 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 CNTFRP26992 372 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 KIR2DS2P43631 304 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 LGALS7P47929 136 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 FOXL1Q12952 345 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 CATR1Q13166 79 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 TMEM177Q53S58 311 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 OR2B11Q5JQS5 317 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 OR51H1Q8NH63 302 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 MARCH1Q8TCQ1 289 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 MRGPRFQ96AM1 343 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 ZNF486Q96H40 463 aaPredicted RBP13.52□□□□□ -0.25
FOXN4-203ENST00000423960 TSNAXQ99598 290 aaKnown RBP13.52□□□□□ -0.25
FOXN4-203ENST00000423960 RASL11BQ9BPW5 248 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 C16orf95Q9H693 158 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 KIAA1456Q9P272 454 aa13.52□□□□□ -0.25
FOXN4-203ENST00000423960 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 SHOXO15266 292 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 CRYZL1O95825 349 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 PI3P19957 117 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 BRWD1-AS2P59051 145 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 SURF2Q15527 256 aaPredicted RBP13.51□□□□□ -0.25
FOXN4-203ENST00000423960 Q6ZS46 218 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 SPAG16Q8N0X2 631 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 Q8N2B8 174 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 POC5Q8NA72 575 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 OR13C8Q8NGS7 320 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 SCGB3A2Q96PL1 93 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 BEX1Q9HBH7 125 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 TENM1Q9UKZ4 2725 aa13.51□□□□□ -0.25
FOXN4-203ENST00000423960 NAP1L6A6NFF2 107 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 SH2D7A6NKC9 451 aaPredicted RBP13.5□□□□□ -0.25
FOXN4-203ENST00000423960 CENPXA8MT69 81 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 RRHO14718 337 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 NDUFA3O95167 84 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 RLN1P04808 185 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
FOXN4-203ENST00000423960 RND3P61587 244 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 PSG5Q15238 335 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 C9orf152Q5JTZ5 239 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 TBC1D26Q86UD7 250 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 OR2T6Q8NHC8 308 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 LINC01006Q8NI28 216 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 OSR1Q8TAX0 266 aaPredicted RBP13.5□□□□□ -0.25
FOXN4-203ENST00000423960 CD300LFQ8TDQ1 290 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 HARBI1Q96MB7 349 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 LIN7CQ9NUP9 197 aaKnown RBP13.5□□□□□ -0.25
FOXN4-203ENST00000423960 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
FOXN4-203ENST00000423960 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 CLPSL1A2RUU4 121 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 SRRM4A7MD48 611 aaKnown RBP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 MPPED1O15442 326 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 RBFOX2O43251 390 aaKnown RBP eCLIP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 F2RP25116 425 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 PIGPP57054 158 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 PLGLAQ15195 96 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 LIN54Q6MZP7 749 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 TCTEX1D1Q8N7M0 179 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
FOXN4-203ENST00000423960 SIGLEC9Q9Y336 463 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 MMP24Q9Y5R2 645 aa13.49□□□□□ -0.25
FOXN4-203ENST00000423960 RAMP3O60896 148 aa13.48□□□□□ -0.25
FOXN4-203ENST00000423960 SPDEFO95238 335 aa13.48□□□□□ -0.25
FOXN4-203ENST00000423960 IGLV2-23P01705 113 aa13.48□□□□□ -0.25
FOXN4-203ENST00000423960 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
FOXN4-203ENST00000423960 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
FOXN4-203ENST00000423960 CCDC71LQ8N9Z2 235 aa13.48□□□□□ -0.25
FOXN4-203ENST00000423960 SLC25A21Q9BQT8 299 aaPredicted RBP13.48□□□□□ -0.25
FOXN4-203ENST00000423960 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
FOXN4-203ENST00000423960 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms