RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 A0A0B4J293 547 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 RAMP3O60896 148 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 LPAR6P43657 344 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 BRWD1-AS2P59051 145 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 LIAT1Q6ZQX7 453 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 LGI3Q8N145 548 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 MITD1Q8WV92 249 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 CFHR4Q92496 578 aa12.85□□□□□ -0.35
ABCA1-203ENST00000423487 A0A0B4J2A0 478 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 CDS2O95674 445 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 HPRT1P00492 218 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 PAX6P26367 422 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 ZNF695Q8IW36 515 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
ABCA1-203ENST00000423487 IL22RA2Q969J5 263 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 PLEKHA2Q9HB19 425 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 SHPKQ9UHJ6 478 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM56-RWDD3S4R434 201 aa12.84□□□□□ -0.35
ABCA1-203ENST00000423487 VGLL3A8MV65 326 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 ATG12O94817 140 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 CRYZL1O95825 349 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 DYNLT3P51808 116 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 ANKRD55Q3KP44 614 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 TMEM177Q53S58 311 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 BCL6BQ8N143 479 aaPredicted RBP12.83□□□□□ -0.35
ABCA1-203ENST00000423487 LRTM2Q8N967 370 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.35
ABCA1-203ENST00000423487 RBPMSQ93062 196 aaKnown RBP12.83□□□□□ -0.35
ABCA1-203ENST00000423487 OR51J1Q9H342 316 aa12.83□□□□□ -0.35
ABCA1-203ENST00000423487 SOX21Q9Y651 276 aaPredicted RBP12.83□□□□□ -0.35
ABCA1-203ENST00000423487 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 FAM90A9PA6NNJ1 464 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 SSNA1O43805 119 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 VENTXO95231 258 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 IGKV1-16P04430 117 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 FAM106CPP0CH98 169 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 SCGB2A2Q13296 93 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 AANATQ16613 207 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 DEFB112Q30KQ8 113 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 TMEM268Q5VZI3 342 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 THNSL2Q86YJ6 484 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 RNF5Q99942 180 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 AIFM2Q9BRQ8 373 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 COMMD9Q9P000 198 aa12.83□□□□□ -0.36
ABCA1-203ENST00000423487 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 SHOXO15266 292 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 S1PR2O95136 353 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 HRASP01112 189 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 SNRNP70P08621 437 aaKnown RBP12.82□□□□□ -0.36
ABCA1-203ENST00000423487 RPS16P62249 146 aaKnown RBP12.82□□□□□ -0.36
ABCA1-203ENST00000423487 HES1Q14469 280 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 LRRC75BQ2VPJ9 315 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 SELENOHQ8IZQ5 122 aaKnown RBP12.82□□□□□ -0.36
ABCA1-203ENST00000423487 OR2T10Q8NGZ9 312 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 LHFPL5Q8TAF8 219 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 CDC42EP3Q9UKI2 254 aa12.82□□□□□ -0.36
ABCA1-203ENST00000423487 DUXBA0A1W2PPF3 345 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 MOSP00540 346 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 NQO2P16083 231 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 LGALS7P47929 136 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 ERVK-16P61578 105 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 EBI3Q14213 229 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 ZDHHC16Q969W1 377 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 R3HDM4Q96D70 268 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 SSX3Q99909 188 aa12.81□□□□□ -0.36
ABCA1-203ENST00000423487 GSX1Q9H4S2 264 aaPredicted RBP12.81□□□□□ -0.36
ABCA1-203ENST00000423487 CD24P25063 80 aa12.8□□□□□ -0.36
ABCA1-203ENST00000423487 AKR1C2P52895 323 aa12.8□□□□□ -0.36
ABCA1-203ENST00000423487 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
ABCA1-203ENST00000423487 RNASE11Q8TAA1 199 aaKnown RBP12.8□□□□□ -0.36
ABCA1-203ENST00000423487 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
ABCA1-203ENST00000423487 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
ABCA1-203ENST00000423487 TSNAXQ99598 290 aaKnown RBP12.8□□□□□ -0.36
ABCA1-203ENST00000423487 MED28Q9H204 178 aa12.8□□□□□ -0.36
ABCA1-203ENST00000423487 PRDM13Q9H4Q3 707 aa12.8□□□□□ -0.36
ABCA1-203ENST00000423487 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 MARCH11A6NNE9 402 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 KRASP01116 189 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 IFNA21P01568 189 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 VDAC1P21796 283 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 HNF4GQ14541 408 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 POU2AF1Q16633 256 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 LYZL2Q7Z4W2 148 aa12.79□□□□□ -0.36
ABCA1-203ENST00000423487 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms