RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CLDN14O95500 239 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 HIST1H2BLQ99880 126 aa13.18□□□□□ -0.3
CDH1-202ENST00000422392 CRYAAP02489 173 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 GALR1P47211 349 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 OR51G1Q8NGK1 321 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 S100PBPQ96BU1 408 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 AGMATQ9BSE5 352 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 PCGF1Q9BSM1 259 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
CDH1-202ENST00000422392 COX5AP20674 150 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 UBE2G2P60604 165 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 P2RY6Q15077 328 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 PRSS8Q16651 343 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 VKORC1L1Q8N0U8 176 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 CLCF1Q9UBD9 225 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
CDH1-202ENST00000422392 H7BYZ3 331 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 NPPCP23582 126 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 Q6ZT83 130 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 LINC00469Q8N7U9 141 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 ZNF709Q8N972 641 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 ACTR3CQ9C0K3 210 aaPredicted RBP13.16□□□□□ -0.3
CDH1-202ENST00000422392 RAB29O14966 203 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 PROP1O75360 226 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 COL8A2P25067 703 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 TNFSF10P50591 281 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 FOXF2Q12947 444 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 INO80CQ6PI98 192 aaPredicted RBP13.16□□□□□ -0.3
CDH1-202ENST00000422392 UNQ6494/PRO21346Q6UXR6 183 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 SRD5A3Q9H8P0 318 aa13.16□□□□□ -0.3
CDH1-202ENST00000422392 EP300Q09472 2414 aaPredicted RBP13.15□□□□□ -0.3
CDH1-202ENST00000422392 TMEM250H0YL14 139 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 FCGR3BO75015 233 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 CECR9P0C854 216 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 SP9P0CG40 484 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 Q8N7P7 452 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 WDR31Q8NA23 367 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 CXXC4Q9H2H0 198 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 GFOD1Q9NXC2 390 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
CDH1-202ENST00000422392 DSCAMO60469 2012 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
CDH1-202ENST00000422392 SMCO3A2RU48 225 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 C15orf62A8K5M9 175 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 IGKV3-15P01624 115 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 GYPAP02724 150 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
CDH1-202ENST00000422392 EDDM3BP56851 147 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 PMS2P11Q13670 270 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 R3HDM4Q96D70 268 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 DERL1Q9BUN8 251 aa13.15□□□□□ -0.3
CDH1-202ENST00000422392 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 HOXC12P31275 282 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 CHRNA7P36544 502 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 CDC34P49427 236 aaPredicted RBP13.14□□□□□ -0.31
CDH1-202ENST00000422392 CCL11P51671 97 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 OR5B12Q96R08 314 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 MRPL37Q9BZE1 423 aaKnown RBP13.14□□□□□ -0.31
CDH1-202ENST00000422392 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
CDH1-202ENST00000422392 PITPNC1Q9UKF7 332 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 YLPM1P49750 1951 aaKnown RBP13.14□□□□□ -0.31
CDH1-202ENST00000422392 MBP02144 154 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
CDH1-202ENST00000422392 ATP5G3P48201 142 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 TAAR6Q96RI8 345 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 TMEM204Q9BSN7 226 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
CDH1-202ENST00000422392 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 NKX2-8O15522 239 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 MAP1BP46821 2468 aaKnown RBP13.13□□□□□ -0.31
CDH1-202ENST00000422392 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
CDH1-202ENST00000422392 DEFA6Q01524 100 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 UTF1Q5T230 341 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 Q8TCH9 128 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 TMEM37Q8WXS4 190 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 PYGO2Q9BRQ0 406 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 TNCP24821 2201 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 C15orf65H3BRN8 121 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 TGOLN2O43493 480 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 AMBPP02760 352 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 VWC2Q2TAL6 325 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms