RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CNIH1O95406 144 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 EGR2P11161 476 aaPredicted RBP11.93□□□□□ -0.5
NUP50-204ENST00000417702 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
NUP50-204ENST00000417702 TMBIM6P55061 237 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 EGFEM1PQ0D2K5 195 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
NUP50-204ENST00000417702 FXYD3Q14802 87 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 ACTBL2Q562R1 376 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 PYHIN1Q6K0P9 492 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 ARPC1AQ92747 370 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 S100A16Q96FQ6 103 aaKnown RBP11.93□□□□□ -0.5
NUP50-204ENST00000417702 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
NUP50-204ENST00000417702 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 ANXA10Q9UJ72 324 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 OR2W1Q9Y3N9 320 aa11.93□□□□□ -0.5
NUP50-204ENST00000417702 SSX5O60225 188 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 SLC22A5O76082 557 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 OR8U8P0C7N1 319 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 NFYAP23511 347 aaPredicted RBP11.92□□□□□ -0.5
NUP50-204ENST00000417702 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
NUP50-204ENST00000417702 KRTAP10-11P60412 298 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 RUNX1Q01196 453 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 FHL3Q13643 280 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 MZT2AQ6P582 158 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 SAMD12Q8N8I0 201 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 AP3S1Q92572 193 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 CMTM3Q96MX0 182 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 TPSG1Q9NRR2 321 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
NUP50-204ENST00000417702 I3L521 148 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 SOX15O60248 233 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 HLA-DQB1P01920 261 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
NUP50-204ENST00000417702 ARPC4P59998 168 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 GNB1P62873 340 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 ZNF616Q08AN1 781 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
NUP50-204ENST00000417702 SEC14L6B5MCN3 397 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 XRCC3O43542 346 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 CRYZL1O95825 349 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 CRYGBP07316 175 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 DEFB121Q5J5C9 76 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
NUP50-204ENST00000417702 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 DDB2Q92466 427 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 SLA2Q9H6Q3 261 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
NUP50-204ENST00000417702 PRELID3BQ9Y3B1 194 aa11.9□□□□□ -0.5
NUP50-204ENST00000417702 TNCP24821 2201 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
NUP50-204ENST00000417702 LINC00473A8K010 186 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 K7EIL1 84 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 ARPC1BO15143 372 aaKnown RBP11.89□□□□□ -0.51
NUP50-204ENST00000417702 TUSC2O75896 110 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 APOA1P02647 267 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 CBX5P45973 191 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 TPPP2P59282 170 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 UBE2KP61086 200 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 DGCR2P98153 550 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 PJVKQ0ZLH3 352 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 SPCS2Q15005 226 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 KCTD9Q7L273 389 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 MS4A10Q96PG2 267 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 DCUN1D5Q9BTE7 237 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
NUP50-204ENST00000417702 MRPS7Q9Y2R9 242 aaKnown RBP11.89□□□□□ -0.51
NUP50-204ENST00000417702 IGKV1D-13A0A0B4J2D9 117 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 SMIM31A0A1B0GVY4 71 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 RAMP3O60896 148 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 FCGR3BO75015 233 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 TRGV3P03979 118 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
NUP50-204ENST00000417702 IGKV1-13P0DP09 117 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 GVQW1Q8N7I0 195 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 ISOC1Q96CN7 298 aa11.88□□□□□ -0.51
NUP50-204ENST00000417702 HSD17B10Q99714 261 aaKnown RBP11.88□□□□□ -0.51
NUP50-204ENST00000417702 CCDC160A6NGH7 325 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 LINC01619G3V211 115 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 H3BUA1 57 aa11.87□□□□□ -0.51
NUP50-204ENST00000417702 CREBL2O60519 120 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms