RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
ITGB1-204ENST00000417122 SHOXO15266 292 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 CRYGBP07316 175 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 GNB1P62873 340 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 PYHIN1Q6K0P9 492 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 CROCCP3Q8IVE0 287 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 DDB2Q92466 427 aa12.14□□□□□ -0.47
ITGB1-204ENST00000417122 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
ITGB1-204ENST00000417122 LINC00473A8K010 186 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 CNIH1O95406 144 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 OR8U8P0C7N1 319 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 CD40LGP29965 261 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 LSM3P62310 102 aaKnown RBP12.13□□□□□ -0.47
ITGB1-204ENST00000417122 ZNF616Q08AN1 781 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 GRPEL2Q8TAA5 225 aa12.13□□□□□ -0.47
ITGB1-204ENST00000417122 WI2-2373I1.2A0A1W2PRP0 233 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 SLC22A5O76082 557 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 CRYZL1O95825 349 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 RPS19P39019 145 aaKnown RBP12.12□□□□□ -0.47
ITGB1-204ENST00000417122 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-204ENST00000417122 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 C9orf66Q5T8R8 295 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 GVQW1Q8N7I0 195 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 BEST4Q8NFU0 473 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 ALX4Q9H161 411 aaPredicted RBP12.12□□□□□ -0.47
ITGB1-204ENST00000417122 AUNIPQ9H7T9 357 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
ITGB1-204ENST00000417122 TGP01266 2768 aa12.12□□□□□ -0.47
ITGB1-204ENST00000417122 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 SEC14L6B5MCN3 397 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 TUSC2O75896 110 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 IGLV2-14P01704 120 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 TPPP2P59282 170 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 ARPC4P59998 168 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 OSR1Q8TAX0 266 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-204ENST00000417122 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
ITGB1-204ENST00000417122 RBMX2Q9Y388 322 aaKnown RBP12.11□□□□□ -0.47
ITGB1-204ENST00000417122 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 XRCC3O43542 346 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 FCGR3BO75015 233 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 LGALS1P09382 135 aaKnown RBP12.1□□□□□ -0.47
ITGB1-204ENST00000417122 PTHLHP12272 177 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 UBE2KP61086 200 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 DGCR2P98153 550 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 UBE2NLQ5JXB2 153 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 S100A16Q96FQ6 103 aaKnown RBP12.1□□□□□ -0.47
ITGB1-204ENST00000417122 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 PRELID3BQ9Y3B1 194 aa12.1□□□□□ -0.47
ITGB1-204ENST00000417122 LINC01619G3V211 115 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 RAMP3O60896 148 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 IGHV3-11P01762 117 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 TRGV3P03979 118 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 FCER2P06734 321 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 CBX5P45973 191 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
ITGB1-204ENST00000417122 MRGPRG-AS1Q2M3A8 158 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 OR2B11Q5JQS5 317 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 IDO2Q6ZQW0 420 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 POC5Q8NA72 575 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 OR5T1Q8NG75 326 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 DCUN1D4Q92564 292 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 RHOVQ96L33 236 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 TMEM68Q96MH6 324 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
ITGB1-204ENST00000417122 FUNDC2Q9BWH2 189 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
ITGB1-204ENST00000417122 MRPS7Q9Y2R9 242 aaKnown RBP12.09□□□□□ -0.47
ITGB1-204ENST00000417122 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 A0A087WW49 117 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 MEIS3P1A6NDR6 274 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 H3BUA1 57 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 OVOL1O14753 267 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 AADACP22760 399 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 FCGR2CP31995 323 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-204ENST00000417122 TNXAQ16473 311 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 PRSS8Q16651 343 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 SAMD12Q8N8I0 201 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 TCTEX1D2Q8WW35 142 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 PHB2Q99623 299 aa12.08□□□□□ -0.48
ITGB1-204ENST00000417122 HSPB1P04792 205 aaKnown RBP12.07□□□□□ -0.48
ITGB1-204ENST00000417122 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-204ENST00000417122 INSL3P51460 131 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 SLURP1P55000 103 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 NCS1P62166 190 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 CDK10Q15131 360 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms