RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 OR2B11Q5JQS5 317 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 HEPN1Q6WQI6 88 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 CIARTQ8N365 385 aaPredicted RBP11.98□□□□□ -0.49
SGCE-202ENST00000415788 LINC01356Q8N9X3 169 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 RSRP1Q9BUV0 290 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 SMIM3Q9BZL3 60 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 KCNIP3Q9Y2W7 256 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 TMED3Q9Y3Q3 217 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
SGCE-202ENST00000415788 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
SGCE-202ENST00000415788 PHF1O43189 567 aaPredicted RBP11.97□□□□□ -0.49
SGCE-202ENST00000415788 OR2C1O95371 312 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 MSMBP08118 114 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 S100A2P29034 98 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 CD81P60033 236 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 MAPK1IP1LQ8NDC0 245 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 C18orf12Q96KH6 178 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 PLEKHJ1Q9NW61 149 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 ZNF581Q9P0T4 197 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 LOC105371242A0A075B767 164 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 HSPB6O14558 160 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 FCN3O75636 299 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 PRH1P02810 166 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 IGHV4-31P0DP07 118 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 FOSL1P15407 271 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 OR2B8PP59922 312 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 KIAA0141Q14154 515 aaPredicted RBP11.97□□□□□ -0.49
SGCE-202ENST00000415788 LRTM2Q8N967 370 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 C8orf46Q8TAG6 207 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 CD300LFQ8TDQ1 290 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 NEK7Q8TDX7 302 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 DCTN5Q9BTE1 182 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
SGCE-202ENST00000415788 A0A087WWC5 75 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 A0A1W2PPE2 198 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 BTBD17A6NE02 478 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 SMAD7O15105 426 aaKnown RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 ENSAO43768 121 aaKnown RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 ARG1P05089 322 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 LIPFP07098 398 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 LCN2P80188 198 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 SOHLH1Q5JUK2 328 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 CYB5R2Q6BCY4 276 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 H1FXQ92522 213 aaKnown RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 ZNF2Q9BSG1 426 aaPredicted RBP11.96□□□□□ -0.49
SGCE-202ENST00000415788 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
SGCE-202ENST00000415788 GATA3P23771 443 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 EDDM3BP56851 147 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 RPL31P62899 125 aaKnown RBP11.95□□□□□ -0.5
SGCE-202ENST00000415788 EDDM3AQ14507 147 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
SGCE-202ENST00000415788 PFDN5Q99471 154 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 RPUSD1Q9UJJ7 312 aaKnown RBP11.95□□□□□ -0.5
SGCE-202ENST00000415788 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 C22orf46C9J442 243 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 SCGB1D2O95969 90 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
SGCE-202ENST00000415788 CD99P14209 185 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 DEFA6Q01524 100 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 AESQ08117 197 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 SLC35E4Q6ICL7 350 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 BTNL3Q6UXE8 466 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 FGFRL1Q8N441 504 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 TMEM186Q96B77 213 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 LPAR2Q9HBW0 351 aa11.95□□□□□ -0.5
SGCE-202ENST00000415788 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
SGCE-202ENST00000415788 IGHV2-70DA0A0C4DH43 119 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 CXorf65A6NEN9 183 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 TMEM187Q14656 261 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 GAPTQ8N292 157 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 COQ2Q96H96 371 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 PARP12Q9H0J9 701 aaKnown RBP11.94□□□□□ -0.5
SGCE-202ENST00000415788 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
SGCE-202ENST00000415788 NAA60Q9H7X0 242 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 SIRT7Q9NRC8 400 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 OR6C3Q9NZP0 311 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 FBXO7Q9Y3I1 522 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
SGCE-202ENST00000415788 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
SGCE-202ENST00000415788 KIR2DS1A0A191URI9 304 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 ODAMA1E959 279 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 TGFAP01135 160 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 PPIAL4GP0DN37 164 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
SGCE-202ENST00000415788 PAX2Q02962 417 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
SGCE-202ENST00000415788 OR13D1Q8NGV5 346 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms