RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 IFT46Q9NQC8 304 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 PRELID3BQ9Y3B1 194 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 NUBP2Q9Y5Y2 271 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 TGP01266 2768 aa8.75□□□□□ -1.01
RFFL-204ENST00000414419 TNCP24821 2201 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 TRIM64CA6NLI5 447 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 CRYZL1O95825 349 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 FCGR2CP31995 323 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 CRIP2P52943 208 aaPredicted RBP8.74□□□□□ -1.01
RFFL-204ENST00000414419 VBP1P61758 197 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 KCTD9Q7L273 389 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 GVQW1Q8N7I0 195 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 ZNF491Q8N8L2 437 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 OR11H1Q8NG94 326 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 GRPEL2Q8TAA5 225 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 OSR1Q8TAX0 266 aaPredicted RBP8.74□□□□□ -1.01
RFFL-204ENST00000414419 SLC25A46Q96AG3 418 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 C5orf30Q96GV9 206 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 OR5B12Q96R08 314 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 ZNF355PQ9NSJ1 428 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 ZMAT5Q9UDW3 170 aaKnown RBP8.74□□□□□ -1.01
RFFL-204ENST00000414419 MRPS7Q9Y2R9 242 aaKnown RBP8.74□□□□□ -1.01
RFFL-204ENST00000414419 RBMX2Q9Y388 322 aaKnown RBP8.74□□□□□ -1.01
RFFL-204ENST00000414419 FBXO7Q9Y3I1 522 aa8.74□□□□□ -1.01
RFFL-204ENST00000414419 SMIM31A0A1B0GVY4 71 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 MEIS3P1A6NDR6 274 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 LINC00473A8K010 186 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 FCGR3BO75015 233 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 IGLV2-23P01705 113 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 FCER2P06734 321 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 EGR2P11161 476 aaPredicted RBP8.73□□□□□ -1.01
RFFL-204ENST00000414419 PTHLHP12272 177 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 NCS1P62166 190 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 OR1N2Q8NGR9 330 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 OR13F1Q8NGS4 319 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 MYOZ3Q8TDC0 251 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 SECTM1Q8WVN6 248 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 DDB2Q92466 427 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 PHB2Q99623 299 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 HSD17B10Q99714 261 aaKnown RBP8.73□□□□□ -1.01
RFFL-204ENST00000414419 SLA2Q9H6Q3 261 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 GNB4Q9HAV0 340 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 AURKAIP1Q9NWT8 199 aaPredicted RBP8.73□□□□□ -1.01
RFFL-204ENST00000414419 COMMD3Q9UBI1 195 aa8.73□□□□□ -1.01
RFFL-204ENST00000414419 IGKV1D-13A0A0B4J2D9 117 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 I3L521 148 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 SOX15O60248 233 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 CREBL2O60519 120 aaPredicted RBP8.72□□□□□ -1.01
RFFL-204ENST00000414419 ACTL6BO94805 426 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TRGV3P03979 118 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 OR8U8P0C7N1 319 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 IGKV1-13P0DP09 117 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
RFFL-204ENST00000414419 RORCP51449 518 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TPPP2P59282 170 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TAS2R20P59543 309 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 UBE2KP61086 200 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 RUNX1Q01196 453 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 ZNF616Q08AN1 781 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 PJVKQ0ZLH3 352 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 KIAA0141Q14154 515 aaPredicted RBP8.72□□□□□ -1.01
RFFL-204ENST00000414419 CDK10Q15131 360 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 C19orf54Q5BKX5 351 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 OR2B11Q5JQS5 317 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TEX45Q8NA69 505 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 OR5AP2Q8NGF4 316 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 CASTOR1Q8WTX7 329 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TCTEX1D2Q8WW35 142 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 ACOT12Q8WYK0 555 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 TMEM68Q96MH6 324 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 MS4A10Q96PG2 267 aa8.72□□□□□ -1.01
RFFL-204ENST00000414419 SRRM4A7MD48 611 aaKnown RBP8.71□□□□□ -1.02
RFFL-204ENST00000414419 ARPC1BO15143 372 aaKnown RBP8.71□□□□□ -1.02
RFFL-204ENST00000414419 PPYP01298 95 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 CRYGBP07316 175 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 AADACP22760 399 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 PRSS3P35030 304 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 FXYD4P59646 89 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 HERV-K104P61576 105 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 TNXAQ16473 311 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 C9orf66Q5T8R8 295 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 MZT2AQ6P582 158 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 ZNF66Q6ZN08 573 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 MFSD4AQ8N468 514 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 ZBTB34Q8NCN2 500 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 OR5T1Q8NG75 326 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 OR4S2Q8NH73 311 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 AP3S1Q92572 193 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 CMTM3Q96MX0 182 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 MRPS26Q9BYN8 205 aaKnown RBP8.71□□□□□ -1.02
RFFL-204ENST00000414419 SLC5A7Q9GZV3 580 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 CCL28Q9NRJ3 127 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 TAS2R8Q9NYW2 309 aa8.71□□□□□ -1.02
RFFL-204ENST00000414419 C13orf42A0A1B0GVH6 325 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 SEC14L6B5MCN3 397 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 H3BUA1 57 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 MPPED1O15442 326 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 TNFSF12O43508 249 aa8.7□□□□□ -1.02
RFFL-204ENST00000414419 HRASP01112 189 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms