RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CRISP2P16562 243 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 ERVFRD-1P60508 538 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 OXLD1Q5BKU9 147 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 MBNL2Q5VZF2 373 aaKnown RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 NEIL1Q96FI4 390 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 ATG101Q9BSB4 218 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 NAA60Q9H7X0 242 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 FAM215AQ9Y5M1 114 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 OR7C2O60412 319 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 TNFSF13O75888 250 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 CA2P00918 260 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 OTX1P32242 354 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 RPS11P62280 158 aaKnown RBP eCLIP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 C9orf152Q5JTZ5 239 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 C20orf204Q6ZNR8 217 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 OR10D4PQ8NGN7 298 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 LILRB1Q8NHL6 650 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF524Q96C55 264 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 SDHCQ99643 169 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 SOSTQ9BQB4 213 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 K7EM74 188 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 RHBDL1O75783 438 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 IGKV3-15P01624 115 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 IGFBP3P17936 291 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 COX7A1P24310 79 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 MRPS11P82912 194 aaKnown RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF345Q14585 488 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM183BQ1AE95 376 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM65Q6PI78 240 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 OR1N2Q8NGR9 330 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 SSC4DQ8WTU2 575 aa7.25□□□□□ -1.25
SYNE1-211ENST00000413186 MRPL37Q9BZE1 423 aaKnown RBP7.25□□□□□ -1.25
SYNE1-211ENST00000413186 A0A087X0M5 115 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 A0A0G2JK05 382 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 A0A1B0GX30 115 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 DUXBA0A1W2PPF3 345 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 MPC2O95563 127 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SLC25A4P12235 298 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 PI3P19957 117 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 OMGP23515 440 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 GNG10P50151 68 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 TPPP2P59282 170 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF260Q3ZCT1 412 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 GVQW1Q8N7I0 195 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SPSB4Q96A44 273 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 NPDC1Q9NQX5 325 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-211ENST00000413186 PRR32B1ATL7 298 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 RAB27BO00194 218 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 OR2C1O95371 312 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SRP14P37108 136 aaKnown RBP7.24□□□□□ -1.25
SYNE1-211ENST00000413186 UBE2G1P62253 170 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 TWIST1Q15672 202 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SLC35E4Q6ICL7 350 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 KCNRGQ8N5I3 272 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 DPH3Q96FX2 82 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 DOCK7Q96N67 2140 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 PIPOXQ9P0Z9 390 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 WASHC3Q9Y3C0 194 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 A0A1W2PP11 408 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 PQLC2LA1A4F0 135 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 ODAMA1E959 279 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 FOXH1O75593 365 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 CYB5R3P00387 301 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-211ENST00000413186 WNT5AP41221 380 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 WDR31Q8NA23 367 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 KDF1Q8NAX2 398 aaPredicted RBP7.24□□□□□ -1.25
SYNE1-211ENST00000413186 OR11H7Q8NGC8 314 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SHARPINQ9H0F6 387 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 PNRC2Q9NPJ4 139 aaKnown RBP7.24□□□□□ -1.25
SYNE1-211ENST00000413186 ZNF735P0CB33 412 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 SMIM17P0DL12 118 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 CD200P41217 278 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 CCDC144NLQ6NUI1 221 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 FBLN5Q9UBX5 448 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 OR2W1Q9Y3N9 320 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 GTF3C1Q12789 2109 aa7.24□□□□□ -1.25
SYNE1-211ENST00000413186 DEFB108AA8MXU0 73 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 SLC25A17O43808 307 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 PPYP01298 95 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 DAOP14920 347 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 TMEM33P57088 247 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ACOT6Q3I5F7 207 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-211ENST00000413186 SHEQ5VZ18 495 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 IGF2RP11717 2491 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 PHF3Q92576 2039 aaKnown RBP7.23□□□□□ -1.25
SYNE1-211ENST00000413186 IGHV3-43A0A0B4J1X8 118 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ZFP92A6NM28 416 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 HPXP02790 462 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 PRSS1P07477 247 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 IGHV3-43DP0DP04 118 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ACP7Q6ZNF0 438 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 MRPL55Q7Z7F7 128 aaKnown RBP7.23□□□□□ -1.25
SYNE1-211ENST00000413186 RAB40CQ96S21 281 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 BEX4Q9NWD9 120 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-211ENST00000413186 WISP1O95388 367 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 CD74P04233 296 aa7.23□□□□□ -1.25
SYNE1-211ENST00000413186 ERHP84090 104 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms