RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PRRC2CQ9Y520 2896 aaKnown RBP9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 TTC28Q96AY4 2481 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 LOC400499M0QZD8 3231 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 C17orf112F2Z3M2 114 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 ITGB1BP1O14713 200 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 OR9G9P0C7N8 305 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 CEACAM8P31997 349 aaPredicted RBP9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 MEOX2P50222 304 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 RPP30P78346 268 aaKnown RBP9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 CTAG1AP78358 180 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 HNF4GQ14541 408 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 PRAMEF5Q5TYX0 476 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 OR10G9Q8NGN4 311 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 OR4A16Q8NH70 328 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 FAM57AQ8TBR7 257 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 S1PR3Q99500 378 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 ACTR3CQ9C0K3 210 aaPredicted RBP9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 CALYQ9NYX4 217 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 METTL1Q9UBP6 276 aaKnown RBP9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 GAB2Q9UQC2 676 aa9.52□□□□□ -0.88
TRAFD1-202ENST00000412615 A0A1W2PPE3 182 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 KLK10O43240 276 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 S100A8P05109 93 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 KIR2DS2P43631 304 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 RAB7AP51149 207 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 SPCS3P61009 180 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 ERVK-16P61578 105 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 ELOBQ15370 118 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 OR52E5Q8NH55 327 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 NPCDR1Q9BY65 106 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 RNF7Q9UBF6 113 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 IL19Q9UHD0 177 aa9.52□□□□□ -0.89
TRAFD1-202ENST00000412615 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 CGB3P0DN86 165 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 CGB7P0DN87 165 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 ZNF134P52741 427 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 RPS16P62249 146 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 FFAR4Q5NUL3 377 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 ARL6IP6Q8N6S5 226 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 CHD3Q12873 2000 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 A8MXE2 369 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 ATXN7O15265 892 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 IGHV2-5P01817 119 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 NQO2P16083 231 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 PSMB3P49720 205 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 TNFAIP6P98066 277 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 TFF3Q07654 80 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 TCF15Q12870 199 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 RPL39P5Q59GN2 51 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 SLC25A22Q9H936 323 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 USF3Q68DE3 2245 aa9.51□□□□□ -0.89
TRAFD1-202ENST00000412615 K7EM74 188 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 AP4M1O00189 453 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 CYB5BO43169 146 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 CYB5R3P00387 301 aaPredicted RBP9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 TNFSF4P23510 183 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 FAM27E3Q08E93 113 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 SSX9Q7RTT3 188 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 Q8WTZ3 238 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 SDSLQ96GA7 329 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 ZNF251Q9BRH9 671 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 FAM234AQ9H0X4 552 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 GCM1Q9NP62 436 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 ZNF318Q5VUA4 2279 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 KBTBD11-OT1A0A1B0GTJ5 212 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 TM4SF5O14894 197 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 IGHV3-7P01780 117 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 CD1BP29016 333 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 C17orf58Q2M2W7 97 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 MANBALQ9NQG1 85 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 GFOD1Q9NXC2 390 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 URGCP-MRPS24S4R325 110 aa9.5□□□□□ -0.89
TRAFD1-202ENST00000412615 TRGV10A0A0A0MS01 117 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 CLDN34H7C241 214 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 SOX15O60248 233 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 IFNA10P01566 189 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 IGHV1-46P01743 117 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 CXCL1P09341 107 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 BMP5P22003 454 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 CD40P25942 277 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 CD81P60033 236 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 ERVFRD-1P60508 538 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 ACOT6Q3I5F7 207 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 PDLIM3Q53GG5 364 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 FAM201AQ5SY85 155 aa9.49□□□□□ -0.89
TRAFD1-202ENST00000412615 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms