RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 EIF4EBP1Q13541 118 aaPredicted RBP14.77□□□□□ -0.05
SF3A1-202ENST00000411423 UNQ5815/PRO19632Q6UWF5 114 aa14.77□□□□□ -0.05
SF3A1-202ENST00000411423 ARPC1AQ92747 370 aa14.77□□□□□ -0.05
SF3A1-202ENST00000411423 AUNIPQ9H7T9 357 aa14.77□□□□□ -0.05
SF3A1-202ENST00000411423 OR2W1Q9Y3N9 320 aa14.77□□□□□ -0.05
SF3A1-202ENST00000411423 TUSC2O75896 110 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 FXYD3Q14802 87 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 AKIRIN2Q53H80 203 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 ZNF645Q8N7E2 425 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 GRPEL2Q8TAA5 225 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 MS4A10Q96PG2 267 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 GPHA2Q96T91 129 aa14.76□□□□□ -0.05
SF3A1-202ENST00000411423 MEIS3P1A6NDR6 274 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 CRYZL1O95825 349 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 CTXN2P0C2S0 81 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 SMIM18P0DKX4 95 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 LGALS7P47929 136 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 BRWD1-AS2P59051 145 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 NCS1P62166 190 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 TIMM50Q3ZCQ8 353 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 ACTBL2Q562R1 376 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 IDO2Q6ZQW0 420 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 HOGA1Q86XE5 327 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 BEST4Q8NFU0 473 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 OR1N2Q8NGR9 330 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 SNAPC3Q92966 411 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 MCRIP2Q9BUT9 160 aaKnown RBP14.75□□□□□ -0.05
SF3A1-202ENST00000411423 FUNDC2Q9BWH2 189 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 SCOCQ9UIL1 159 aa14.75□□□□□ -0.05
SF3A1-202ENST00000411423 RBMX2Q9Y388 322 aaKnown RBP14.75□□□□□ -0.05
SF3A1-202ENST00000411423 A0A0A6YYH2 397 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 A6NJ64 397 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 SHOXO15266 292 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 OR2B11Q5JQS5 317 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 TCTEX1D1Q8N7M0 179 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 OR5M8Q8NGP6 311 aa14.74□□□□□ -0.05
SF3A1-202ENST00000411423 IGHV4OR15-8A0A075B7B6 117 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 A0A087WW49 117 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 IGHV3-11P01762 117 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 AADACP22760 399 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 SLURP1P55000 103 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 DEFA5Q01523 94 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 ZNF616Q08AN1 781 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 TMEM267Q0VDI3 215 aaPredicted RBP14.73□□□□□ -0.05
SF3A1-202ENST00000411423 RTL8BQ17RB0 113 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 ADTRPQ96IZ2 230 aa14.73□□□□□ -0.05
SF3A1-202ENST00000411423 XRCC3O43542 346 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 FCGR3BO75015 233 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 LGALS1P09382 135 aaKnown RBP14.72□□□□□ -0.05
SF3A1-202ENST00000411423 RRASP10301 218 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 UBE2KP61086 200 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 VBP1P61758 197 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 TAGLNQ01995 201 aaKnown RBP14.72□□□□□ -0.05
SF3A1-202ENST00000411423 OR5T1Q8NG75 326 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 OR13F1Q8NGS4 319 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 DCUN1D4Q92564 292 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 RHOVQ96L33 236 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 GPR61Q9BZJ8 451 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 NAA50Q9GZZ1 169 aaKnown RBP14.72□□□□□ -0.05
SF3A1-202ENST00000411423 VCX3AQ9NNX9 186 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 DIABLOQ9NR28 239 aa14.72□□□□□ -0.05
SF3A1-202ENST00000411423 SEC14L6B5MCN3 397 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 TMEM127O75204 238 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 RBMXL2O75526 392 aaKnown RBP14.71□□□□□ -0.05
SF3A1-202ENST00000411423 SAA1P0DJI8 122 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-202ENST00000411423 APELAP0DMC3 54 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 FCGR2CP31995 323 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 TPPP2P59282 170 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 PRSS8Q16651 343 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 UBE2NLQ5JXB2 153 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 KCTD9Q7L273 389 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 OVCH2Q7RTZ1 564 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 SAMD12Q8N8I0 201 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 DLX4Q92988 240 aaPredicted RBP14.71□□□□□ -0.05
SF3A1-202ENST00000411423 SLC25A46Q96AG3 418 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 CCL28Q9NRJ3 127 aa14.71□□□□□ -0.05
SF3A1-202ENST00000411423 CNIH1O95406 144 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 EIF4EP06730 217 aaKnown RBP14.7□□□□□ -0.06
SF3A1-202ENST00000411423 OR8U8P0C7N1 319 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 TAS2R20P59543 309 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 ARPC4P59998 168 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 CBX3Q13185 183 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 C10orf55Q5SWW7 151 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 C9orf66Q5T8R8 295 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 PYHIN1Q6K0P9 492 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 CROCCP3Q8IVE0 287 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 VKORC1L1Q8N0U8 176 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 TEX45Q8NA69 505 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 OSR1Q8TAX0 266 aaPredicted RBP14.7□□□□□ -0.06
SF3A1-202ENST00000411423 DPF1Q92782 380 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 ANAPC10Q9UM13 185 aa14.7□□□□□ -0.06
SF3A1-202ENST00000411423 TNFSF12O43508 249 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 PPYP01298 95 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 TRGV3P03979 118 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 VMA21Q3ZAQ7 101 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 MFSD4AQ8N468 514 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 POC5Q8NA72 575 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 SECTM1Q8WVN6 248 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 PRR25Q96S07 402 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 ZNF430Q9H8G1 570 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms