RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 OR5D18Q8NGL1 313 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLDND2Q8NHS1 167 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A3Q8NHU0 189 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 IPO4Q8TEX9 1081 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ZNF431Q8TF32 576 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 LEO1Q8WVC0 666 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAPGEF5Q92565 580 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CHMP4CQ96CF2 233 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PLEKHA8Q96JA3 519 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 NAP1L5Q96NT1 182 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4F4Q96R69 305 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLCC1Q96S66 551 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 IMMP2LQ96T52 175 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CITED1Q99966 193 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MLPHQ9BV36 600 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM147Q9BVK8 224 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1QTNF6Q9BXI9 259 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACTR6Q9GZN1 396 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC5A7Q9GZV3 580 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TSPYL1Q9H0U9 437 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR52A5Q9H2C5 316 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 C5orf66Q9H5L9 145 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 DNAJC18Q9H819 358 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PXMP2Q9NR77 195 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1orf123Q9NWV4 160 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 HIGD1BQ9P298 99 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 STAP2Q9UGK3 403 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 SMPXQ9UHP9 88 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 SCP2D1Q9UJQ7 156 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 FBXW2Q9UKT8 454 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 LY96Q9Y6Y9 160 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PCDH11XQ9BZA7 1347 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ERVK-7P63135 1459 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MUC22E2RYF6 1773 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAV12-2A0A075B6T6 113 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SMIM26A0A096LP01 95 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCL15-CCL14A0A0B4J2E2 113 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4C45A6NMZ5 311 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR11H12B2RN74 326 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 E7ESA3 106 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 H3BT86 120 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SDHDO14521 159 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PPIHO43447 177 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 GSTZ1O43708 216 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 NIPSNAP2O75323 286 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 UPK3AO75631 287 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC25A12O75746 678 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRBV12-3P01733 135 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV3-30P01768 117 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 MT-ND5P03915 603 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV3-30-5P0DP03 117 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CALM1P0DP23 149 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CALM2P0DP24 149 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CALM3P0DP25 149 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 HSPA5P11021 654 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC2A3P11169 496 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 COX6A1P12074 109 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 HLA-EP13747 358 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC2A5P22732 501 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PSMA1P25786 263 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PSMA5P28066 241 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 AGTR1P30556 359 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 S100A5P33763 92 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SERPINB10P48595 397 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAB7AP51149 207 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CAPZA1P52907 286 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SUB1P53999 127 aaKnown RBP eCLIP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 FXYD2P54710 66 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 F2RL1P55085 397 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SUMO3P55854 103 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM3AP98173 230 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 MPP1Q00013 466 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 BNIP2Q12982 314 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 XRCC4Q13426 336 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4D1Q15615 310 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 NEDD8Q15843 81 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCL15Q16663 113 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 IDNKQ5T6J7 187 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 EBLN2Q6P2I7 272 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 UTS2BQ765I0 119 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM173Q86WV6 379 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 NRSN1Q8IZ57 195 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 LINC00337Q8N6G1 96 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SIGLECL1Q8N7X8 197 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PRELID2Q8N945 189 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC197Q8NCU1 140 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC150Q8NCX0 1101 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1orf131Q8NDD1 294 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4K14Q8NGD5 310 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR10K1Q8NGX5 313 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR6K2Q8NGY2 324 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2T10Q8NGZ9 312 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR11H2Q8NH07 326 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2AE1Q8NHA4 323 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 FNDC9Q8TBE3 224 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 TEX47Q8TBZ9 253 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 DEFB104AQ8WTQ1 72 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PPP1R1CQ8WVI7 109 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 TCTEX1D2Q8WW35 142 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 RASD2Q96D21 266 aa-2.47□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms