RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 KCNIP3Q9Y2W7 256 aa13.27□□□□□ -0.29
TSPAN4-208ENST00000409531 NBEAL1Q6ZS30 2694 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 TRAV6A0A075B6T7 132 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 MDFIC2A0A1B0GVS7 189 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 DNAJC9-AS1A6NH13 148 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 CRYM-AS1A6NIL9 109 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 CLDN34H7C241 214 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 RBFOX2O43251 390 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■■■□ 21.7
TSPAN4-208ENST00000409531 ANXA3P12429 323 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 PAX6P26367 422 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 RPL30P62888 115 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 SLC25A42Q86VD7 318 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 OR4C13Q8NGP0 309 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 OR4S2Q8NH73 311 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 OR5R1Q8NH85 324 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 SSMEM1Q8WWF3 244 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 CAPSLQ8WWF8 208 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 DUX5Q96PT3 197 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 GPHA2Q96T91 129 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 ALX4Q9H161 411 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 PITPNC1Q9UKF7 332 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 FLVCR2Q9UPI3 526 aa13.26□□□□□ -0.29
TSPAN4-208ENST00000409531 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 C3orf85A0A1B0GTC6 90 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 FAM90A9PA6NNJ1 464 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 H0Y980 276 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 FCGR3BO75015 233 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 PEX14O75381 377 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 MOSP00540 346 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 IER3P46695 156 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 RAG2P55895 527 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 LINC00205P59089 165 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 HES1Q14469 280 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 MINDY2Q8NBR6 621 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM230Q96A57 120 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 FLYWCH2Q96CP2 140 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 RNF5Q99942 180 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 POMT1Q9Y6A1 747 aa13.25□□□□□ -0.29
TSPAN4-208ENST00000409531 PIGBOS1A0A0B4J2F0 54 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 H3BUX3 64 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 HOXA3O43365 443 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 IGKV1D-33P01593 117 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 IGKV1-33P01594 117 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 SERPINE2P07093 398 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 SNRNP70P08621 437 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 MECP2P51608 486 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 DHODHQ02127 395 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 EBI3Q14213 229 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM86BQ8N661 226 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 OSR1Q8TAX0 266 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 AIFM2Q9BRQ8 373 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM89A2RUT3 159 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 CRYZL1O95825 349 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 DHFRP00374 187 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 HPRT1P00492 218 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 RNASE1P07998 156 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 OR4E1P0C645 316 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 RPA2P15927 270 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM11P17152 192 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 ANXA7P20073 488 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 VAMP1P23763 118 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 TRIM16LQ309B1 348 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 C4orf46Q504U0 113 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 OR2B11Q5JQS5 317 aa13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 CCBE1Q6UXH8 406 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-208ENST00000409531 SHOXO15266 292 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 PRAF2O60831 178 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 IGKV1-16P04430 117 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 OR5AC1P0C628 307 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 LGALS7P47929 136 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 RPS16P62249 146 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 SRPXP78539 464 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM177Q53S58 311 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 LIAT1Q6ZQX7 453 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 OR8H1Q8NGG4 311 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 PIFOQ8TCI5 191 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 EAF1Q96JC9 268 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 HARBI1Q96MB7 349 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 TP53RKQ96S44 253 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 TSNAXQ99598 290 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 TMEM222Q9H0R3 208 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 PLEKHA2Q9HB19 425 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 COMMD9Q9P000 198 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
TSPAN4-208ENST00000409531 RAMP3O60896 148 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 ATG12O94817 140 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 SFT2D2O95562 160 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 HRASP01112 189 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 HLA-AP01891 365 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 CD24P25063 80 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 UCP1P25874 307 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms