RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 BVESQ8NE79 360 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 DAPK2Q9UIK4 370 aa11.84□□□□□ -0.51
TPM1-207ENST00000403994 RBM7Q9Y580 266 aaKnown RBP11.84□□□□□ -0.51
TPM1-207ENST00000403994 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
TPM1-207ENST00000403994 LINC00473A8K010 186 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 SHOXO15266 292 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 CNIH1O95406 144 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 RRASP10301 218 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 DUTP33316 252 aaKnown RBP11.83□□□□□ -0.52
TPM1-207ENST00000403994 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 CDNFQ49AH0 187 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 ACSM6Q6P461 480 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 SFXN4Q6P4A7 337 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 ZNF773Q6PK81 442 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 TPRA1Q86W33 373 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 ADTRPQ96IZ2 230 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 RHOVQ96L33 236 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 WWC2-AS2Q96NR7 200 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 RYR3Q15413 4870 aa11.83□□□□□ -0.52
TPM1-207ENST00000403994 SCGNO76038 276 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 CRYZL1O95825 349 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
TPM1-207ENST00000403994 NHLRC4P0CG21 123 aaPredicted RBP11.82□□□□□ -0.52
TPM1-207ENST00000403994 PITPNAQ00169 270 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 DEFA5Q01523 94 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 OR5T1Q8NG75 326 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 YTHDF1Q9BYJ9 559 aaKnown RBP11.82□□□□□ -0.52
TPM1-207ENST00000403994 OR51E2Q9H255 320 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 ZNF355PQ9NSJ1 428 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
TPM1-207ENST00000403994 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
TPM1-207ENST00000403994 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 SPNP16150 400 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 SDC2P34741 201 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 UBE2KP61086 200 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 IDO2Q6ZQW0 420 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 ZNF645Q8N7E2 425 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 ST6GALNAC5Q9BVH7 336 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 DCSTAMPQ9H295 470 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 U3KQK5 164 aa11.81□□□□□ -0.52
TPM1-207ENST00000403994 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 SSX5O60225 188 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 APELAP0DMC3 54 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 NFYAP23511 347 aaPredicted RBP11.8□□□□□ -0.52
TPM1-207ENST00000403994 GNG2P59768 71 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 PRSS8Q16651 343 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 KCTD9Q7L273 389 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 OR6Q1Q8NGQ2 317 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
TPM1-207ENST00000403994 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 TINAGL1Q9GZM7 467 aaPredicted RBP11.8□□□□□ -0.52
TPM1-207ENST00000403994 RNF167Q9H6Y7 350 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 OR2W1Q9Y3N9 320 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
TPM1-207ENST00000403994 A0A0G2JLM5 398 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 J3QRK9 145 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 BRI3O95415 125 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 HLA-DQB1P01920 261 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 CTXN2P0C2S0 81 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 CLEC2LP0C7M8 214 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
TPM1-207ENST00000403994 CD36P16671 472 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 MXD1Q05195 221 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 NEDD8Q15843 81 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 TNXAQ16473 311 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 OVCH2Q7RTZ1 564 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 HAPLN4Q86UW8 402 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
TPM1-207ENST00000403994 PHB2Q99623 299 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 ASCL2Q99929 193 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 COA4Q9NYJ1 87 aa11.79□□□□□ -0.52
TPM1-207ENST00000403994 RBMX2Q9Y388 322 aaKnown RBP11.79□□□□□ -0.52
TPM1-207ENST00000403994 LOC100506127A0A0U1RQW1 187 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 ANKRD34BA5PLL1 514 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 FCGR3BO75015 233 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 RBMXL2O75526 392 aaKnown RBP11.78□□□□□ -0.52
TPM1-207ENST00000403994 IGLV2-14P01704 120 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 GP9P14770 177 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 ZP3P21754 424 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 SCAND1P57086 179 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 DYRK1AQ13627 763 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 CNIH2Q6PI25 160 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 ADAD2Q8NCV1 583 aaKnown RBP11.78□□□□□ -0.52
TPM1-207ENST00000403994 OR5H6Q8NGV6 325 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 ACOT12Q8WYK0 555 aa11.78□□□□□ -0.52
TPM1-207ENST00000403994 ZNF430Q9H8G1 570 aaPredicted RBP11.78□□□□□ -0.52
TPM1-207ENST00000403994 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
TPM1-207ENST00000403994 ANXA10Q9UJ72 324 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms