RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 TNFRSF1AP19438 455 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 KIR2DS2P43631 304 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 TCF23Q7RTU1 214 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 DTD1Q8TEA8 209 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 CORO2AQ92828 525 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 RARRES2Q99969 163 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 RSG1Q9BU20 258 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 TIMM9Q9Y5J7 89 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 TRGV10A0A0A0MS01 117 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 M0R1X1 148 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 NDUFS6O75380 124 aaKnown RBP13.01□□□□□ -0.33
CDC42-203ENST00000400259 LY86O95711 162 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 IRF2P14316 349 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 RAB2AP61019 212 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 RBPJQ06330 500 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 PRR30Q53SZ7 412 aaPredicted RBP13.01□□□□□ -0.33
CDC42-203ENST00000400259 CENPVQ7Z7K6 275 aaPredicted RBP13.01□□□□□ -0.33
CDC42-203ENST00000400259 ARL6IP6Q8N6S5 226 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 DDB2Q92466 427 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
CDC42-203ENST00000400259 COLCA2A8K830 154 aa13□□□□□ -0.33
CDC42-203ENST00000400259 CRYBA1P05813 215 aa13□□□□□ -0.33
CDC42-203ENST00000400259 OR4A8P0C604 315 aa13□□□□□ -0.33
CDC42-203ENST00000400259 DAOP14920 347 aa13□□□□□ -0.33
CDC42-203ENST00000400259 PAX6P26367 422 aa13□□□□□ -0.33
CDC42-203ENST00000400259 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
CDC42-203ENST00000400259 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
CDC42-203ENST00000400259 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
CDC42-203ENST00000400259 CLCC1Q96S66 551 aa13□□□□□ -0.33
CDC42-203ENST00000400259 ZNF729A6NN14 1252 aaPredicted RBP13□□□□□ -0.33
CDC42-203ENST00000400259 ZG16O60844 167 aa13□□□□□ -0.33
CDC42-203ENST00000400259 FCGR3BO75015 233 aa13□□□□□ -0.33
CDC42-203ENST00000400259 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
CDC42-203ENST00000400259 SFT2D1Q8WV19 159 aa13□□□□□ -0.33
CDC42-203ENST00000400259 MBD3L1Q8WWY6 194 aa13□□□□□ -0.33
CDC42-203ENST00000400259 TAF15Q92804 592 aaKnown RBP eCLIP13□□□□□ -0.33
CDC42-203ENST00000400259 RPRMQ9NS64 109 aa13□□□□□ -0.33
CDC42-203ENST00000400259 SH3BGRL2Q9UJC5 107 aa13□□□□□ -0.33
CDC42-203ENST00000400259 OR9G9P0C7N8 305 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
CDC42-203ENST00000400259 RPL39P5Q59GN2 51 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 ZFP82Q8N141 532 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 ZNF439Q8NDP4 499 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 C2CD4CQ8TF44 421 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 PINX1Q96BK5 328 aaKnown RBP12.99□□□□□ -0.33
CDC42-203ENST00000400259 PLPPR2Q96GM1 343 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 CCL13Q99616 98 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 TMEM147Q9BVK8 224 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 PPP1R14DQ9NXH3 145 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
CDC42-203ENST00000400259 SLC31A2O15432 143 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 GYPAP02724 150 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 VWC2Q2TAL6 325 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 AWAT1Q58HT5 328 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 CT45A1Q5HYN5 189 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 OR8G2PQ6IF36 304 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 CT45A3Q8NHU0 189 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 RND1Q92730 232 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 SMCO4Q9NRQ5 59 aa12.99□□□□□ -0.33
CDC42-203ENST00000400259 SPTBN2O15020 2390 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 PTPRQQ9UMZ3 2332 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 BSNQ9UPA5 3926 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 UBE2L5PA0A1B0GUS4 154 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
CDC42-203ENST00000400259 SNRNP70P08621 437 aaKnown RBP12.98□□□□□ -0.33
CDC42-203ENST00000400259 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 TMPRSS3P57727 454 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 GNB2P62879 340 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 ICAM4Q14773 271 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 FAM216BQ8N7L0 139 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 OR52E5Q8NH55 327 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 S1PR3Q99500 378 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 UNKLQ9H9P5 680 aaKnown RBP12.98□□□□□ -0.33
CDC42-203ENST00000400259 RPS10P5Q9NQ39 176 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 IDI2-AS1Q9NZ38 188 aa12.98□□□□□ -0.33
CDC42-203ENST00000400259 S100A8P05109 93 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 S100PP25815 95 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 CCL8P80075 99 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 NANPQ8TBE9 248 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 ISOC2Q96AB3 205 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 QTRT1Q9BXR0 403 aaKnown RBP12.97□□□□□ -0.33
CDC42-203ENST00000400259 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 PCNX1Q96RV3 2341 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 NKX6-3A6NJ46 265 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 SRP19P09132 144 aaKnown RBP12.97□□□□□ -0.33
CDC42-203ENST00000400259 FAM87AP0C7U9 286 aa12.97□□□□□ -0.33
CDC42-203ENST00000400259 NQO2P16083 231 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms