RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 IFNA4P05014 189 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 NANOS2P60321 138 aaKnown RBP13.32□□□□□ -0.28
UFD1-202ENST00000399523 TNXAQ16473 311 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 YIF1BQ5BJH7 314 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 OR2G6Q5TZ20 316 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 TEX45Q8NA69 505 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 CCDC197Q8NCU1 140 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 SETD6Q8TBK2 473 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 C2CD4CQ8TF44 421 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 UQCC2Q9BRT2 126 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 BABAM2Q9NXR7 383 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 PKD1P98161 4303 aa13.32□□□□□ -0.28
UFD1-202ENST00000399523 A0A1W2PPK0 400 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 SHOXO15266 292 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 OR2J3O76001 311 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 CTRB1P17538 263 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 ETV1P50549 477 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 RBMS2Q15434 407 aaKnown RBP13.31□□□□□ -0.28
UFD1-202ENST00000399523 ZIK1Q3SY52 487 aaPredicted RBP13.31□□□□□ -0.28
UFD1-202ENST00000399523 FAM106AQ4KMX7 169 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 GLT8D1Q68CQ7 371 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 CTRB2Q6GPI1 263 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 TMPRSS11AQ6ZMR5 421 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 OR2C3Q8N628 320 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 GVQW1Q8N7I0 195 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 C11orf45Q8TAV5 145 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 FBLIM1Q8WUP2 373 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 RIMS4Q9H426 269 aaPredicted RBP13.31□□□□□ -0.28
UFD1-202ENST00000399523 FGF20Q9NP95 211 aaPredicted RBP13.31□□□□□ -0.28
UFD1-202ENST00000399523 FBXL7Q9UJT9 491 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 APLNQ9ULZ1 77 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 RPL36Q9Y3U8 105 aaKnown RBP13.31□□□□□ -0.28
UFD1-202ENST00000399523 ORC6Q9Y5N6 252 aa13.31□□□□□ -0.28
UFD1-202ENST00000399523 ZNF320A2RRD8 509 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 LALBAP00709 142 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 SCTP09683 121 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 C8orf88P0DMB2 117 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 HTR2CP28335 458 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 UBE2KP61086 200 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 RPS27AP62979 156 aaKnown RBP13.3□□□□□ -0.28
UFD1-202ENST00000399523 HLA-DRB3P79483 266 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
UFD1-202ENST00000399523 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
UFD1-202ENST00000399523 SLC38A6Q8IZM9 456 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 NKAIN3Q8N8D7 197 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 PGLYRP3Q96LB9 341 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 SPIN2AQ99865 258 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 SPIN2BQ9BPZ2 258 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 FBXL17Q9UF56 701 aa13.3□□□□□ -0.28
UFD1-202ENST00000399523 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 ARL3P36405 182 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 CBX3Q13185 183 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 VMA21Q3ZAQ7 101 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 MARC2Q969Z3 335 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 CCDC140Q96MF4 163 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 SLC29A1Q99808 456 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 MAP6D1Q9H9H5 199 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 MGAT4AQ9UM21 535 aa13.29□□□□□ -0.28
UFD1-202ENST00000399523 HSPG2P98160 4391 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 IGKV1-6A0A0C4DH72 117 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 UBBP0CG47 229 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 OR10K2Q6IF99 312 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 IDO2Q6ZQW0 420 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 ACOT12Q8WYK0 555 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 DERL3Q96Q80 235 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
UFD1-202ENST00000399523 TM2D1Q9BX74 207 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 C11orf68Q9H3H3 251 aaKnown RBP13.28□□□□□ -0.28
UFD1-202ENST00000399523 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 RDH8Q9NYR8 311 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 ZNF257Q9Y2Q1 563 aa13.28□□□□□ -0.28
UFD1-202ENST00000399523 EI24O14681 340 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 XRCC3O43542 346 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 RRASP10301 218 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 DCKP27707 260 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.29
UFD1-202ENST00000399523 RTL8BQ17RB0 113 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 CLEC19AQ6UXS0 136 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 NICN1Q9BSH3 213 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 HDHD3Q9BSH5 251 aaPredicted RBP13.27□□□□□ -0.29
UFD1-202ENST00000399523 TMEM59Q9BXS4 323 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 ZNF430Q9H8G1 570 aaPredicted RBP13.27□□□□□ -0.29
UFD1-202ENST00000399523 Q9N2K0 584 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 PLEKHJ1Q9NW61 149 aa13.27□□□□□ -0.29
UFD1-202ENST00000399523 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
UFD1-202ENST00000399523 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 GALNT14Q96FL9 552 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 C5orf30Q96GV9 206 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 C5orf66Q9H5L9 145 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 MRPL27Q9P0M9 148 aaKnown RBP13.26□□□□□ -0.29
UFD1-202ENST00000399523 AK3Q9UIJ7 227 aa13.26□□□□□ -0.29
UFD1-202ENST00000399523 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
UFD1-202ENST00000399523 TSPAN4O14817 238 aa13.25□□□□□ -0.29
UFD1-202ENST00000399523 ACTL6BO94805 426 aa13.25□□□□□ -0.29
UFD1-202ENST00000399523 GALP22466 123 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms