RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 OPN1MWP04001 364 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 OPN1MW2P0DN77 364 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 OPN1MW3P0DN78 364 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 KIR2DS2P43631 304 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 LTC4SQ16873 150 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 MSMPQ1L6U9 139 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 IGFL3Q6UXB1 125 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 CYP2G1PQ6ZSU1 146 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 LRP11Q86VZ4 500 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 MEGF10Q96KG7 1140 aa19.18■□□□□ 0.66
RABGGTA-202ENST00000399409 C15orf62A8K5M9 175 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 FCGR3BO75015 233 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 GLRXP35754 106 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 KLF3P57682 345 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 SPCS3P61009 180 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 OR52E5Q8NH55 327 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 FAM210BQ96KR6 192 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 SMIM7Q9BQ49 75 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 OR6C3Q9NZP0 311 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 URB1O60287 2271 aaKnown RBP19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 M0R1B8 84 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 KBTBD11O94819 623 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 CRYAAP02489 173 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 OR9G9P0C7N8 305 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 LINC00205P59089 165 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 TMEM241Q24JQ0 296 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 ACOT6Q3I5F7 207 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 OR2V2Q96R30 315 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 DIRC2Q96SL1 478 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 GAB2Q9UQC2 676 aa19.17■□□□□ 0.66
RABGGTA-202ENST00000399409 USF3Q68DE3 2245 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 M0R1X1 148 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 ITGB1BP1O14713 200 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 PROP1O75360 226 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 ERVK-16P61578 105 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 PRAMEF5Q5TYX0 476 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 S100PBPQ96BU1 408 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 CHD3Q12873 2000 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 LHBP01229 141 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 CDX1P47902 265 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 LOXL3P58215 753 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 B2MP61769 119 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 OR4A16Q8NH70 328 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 WDR83OSQ9Y284 106 aa19.16■□□□□ 0.66
RABGGTA-202ENST00000399409 TRBV24-1A0A075B6N3 115 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 PTPRBP23467 1997 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 HNF4GQ14541 408 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 PDLIM3Q53GG5 364 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 SPINK9Q5DT21 86 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 NCMAPQ5T1S8 102 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 MOGAT3Q86VF5 341 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 RAB24Q969Q5 203 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 DOK5Q9P104 306 aa19.15■□□□□ 0.66
RABGGTA-202ENST00000399409 NDUFA6P56556 154 aa19.14■□□□□ 0.66
RABGGTA-202ENST00000399409 NKX6-1P78426 367 aaPredicted RBP19.14■□□□□ 0.66
RABGGTA-202ENST00000399409 ZNF474Q6S9Z5 364 aaPredicted RBP19.14■□□□□ 0.66
RABGGTA-202ENST00000399409 GGACTQ9BVM4 153 aa19.14■□□□□ 0.66
RABGGTA-202ENST00000399409 IGHV3OR15-7A0A075B7D8 119 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 MPDU1O75352 247 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 RAB7AP51149 207 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 S1PR3Q99500 378 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 NIT2Q9NQR4 276 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 CALYQ9NYX4 217 aa19.14■□□□□ 0.65
RABGGTA-202ENST00000399409 CD1BP29016 333 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 RPS16P62249 146 aaKnown RBP19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 C1orf185Q5T7R7 199 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 IFI27L2Q9H2X8 130 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 IGLV3-9A0A075B6K5 115 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 SMCO3A2RU48 225 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 TMEM249Q2WGJ8 235 aa19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 INTS1Q8N201 2190 aaKnown RBP19.13■□□□□ 0.65
RABGGTA-202ENST00000399409 CACNA1DQ01668 2161 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 SEC14L6B5MCN3 397 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BKO60814 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BJP06899 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 CGB3P0DN86 165 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 CGB7P0DN87 165 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BOP23527 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BBP33778 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 GATA4P43694 442 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 CDC34P49427 236 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 EDDM3BP56851 147 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BDP58876 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BCP62807 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 ADIRFQ15847 76 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST2H2BEQ16778 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BHQ93079 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BNQ99877 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HIST1H2BMQ99879 126 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 FAM215AQ9Y5M1 114 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 HMGB3O15347 200 aaKnown RBP19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 TRGC2P03986 189 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 BSXQ3C1V8 233 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 ZNRF1Q8ND25 227 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 FAM222BQ8WU58 562 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 ITLN1Q8WWA0 313 aa19.12■□□□□ 0.65
RABGGTA-202ENST00000399409 YIF1AO95070 293 aa19.11■□□□□ 0.65
RABGGTA-202ENST00000399409 TIMP3P35625 211 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms