RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SYNGR1O43759 233 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 Q5BKY6 102 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SLC25A34Q6PIV7 304 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 C12orf54Q6X4T0 127 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 IGKV3D-20A0A0C4DH25 116 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SFTPCP11686 197 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 FCGR2BP31994 310 aaPredicted RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 METTL26Q96S19 204 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SLC25A33Q9BSK2 321 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SRXN1Q9BYN0 137 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 ANXA10Q9UJ72 324 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 DMRT1Q9Y5R6 373 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 TMEM238LA0A1B0GVL6 79 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 A6NJY4 79 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 NMBP08949 121 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 HOXA6P31267 233 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 RAG2P55895 527 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 PSG4Q00888 419 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 C3orf36Q3SXR2 165 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 ZNF658BQ4V348 819 aaPredicted RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 KHDC3LQ587J8 217 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 LURAP1LQ8IV03 231 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 MRPL16Q9NX20 251 aaKnown RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 TNFSF18Q9UNG2 199 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 WIPI2Q9Y4P8 454 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 IBA57Q5T440 356 aaKnown RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 GLMPQ8WWB7 406 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 SLC17A5Q9NRA2 495 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 ARFGEF1Q9Y6D6 1849 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 PRSS23O95084 383 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 ZNF660Q6AZW8 331 aaPredicted RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 ZNF770Q6IQ21 691 aaPredicted RBP8.06□□□□□ -1.12
ATL3-201ENST00000398868 TMEM105Q8N8V8 129 aa8.06□□□□□ -1.12
ATL3-201ENST00000398868 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 C5orf67F2Z3F1 127 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 COX6CP09669 75 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 LSM10Q969L4 123 aaKnown RBP8.05□□□□□ -1.12
ATL3-201ENST00000398868 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 SPTA1P02549 2419 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A1W2PQM1 296 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 PNKDQ8N490 385 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A0G2JMM0 328 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A0U1RQV5 110 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A1W2PPB8 328 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 A0A1W2PRS3 328 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 KIR3DP1A8MWS1 328 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 J3QR06 171 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 PPYP01298 95 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 CTSDP07339 412 aaPredicted RBP8.05□□□□□ -1.12
ATL3-201ENST00000398868 COL4A1P02462 1669 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 PLXNA1Q9UIW2 1896 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 WNT9BO14905 357 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 SAPCD1Q5SSQ6 148 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 LHFPL4Q7Z7J7 247 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 OR13C6PQ8NH95 151 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 LINC00527Q9UJ94 153 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 C9JCJ5 164 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 KIAA0040Q15053 153 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 C2orf83Q53S99 150 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 MARVELD3Q96A59 401 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 PAXXQ9BUH6 204 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 LINC00470Q9BZP3 86 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 NDUFS8O00217 210 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 FCGR3AP08637 254 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 SCTP09683 121 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 RFPL3SP0C7P2 107 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 CKS1BP61024 79 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 C1orf174Q8IYL3 243 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 FADS6Q8N9I5 356 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 SAP25Q8TEE9 199 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 IMMP2LQ96T52 175 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 CLDN16Q9Y5I7 305 aa8.05□□□□□ -1.12
ATL3-201ENST00000398868 PPIAL4CA0A0B4J2A2 164 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 PPIAL4GP0DN37 164 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 CBLN1P23435 193 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 KIR3DL3Q8N743 410 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 ZNRF1Q8ND25 227 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 SSBP3Q9BWW4 388 aaPredicted RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 GHITMQ9H3K2 345 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 SCN5AQ14524 2016 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.129e-7■■■■□ 22.4
ATL3-201ENST00000398868 LOC105371242A0A075B767 164 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 PPP1R17O96001 155 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 BCL2P10415 239 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 ATG4DQ86TL0 474 aaPredicted RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 NIT1Q86X76 327 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 HEATR1Q9H583 2144 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms