RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 KCTD9Q7L273 389 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 LHFPL1Q86WI0 220 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 MRGPRFQ96AM1 343 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 ADTRPQ96IZ2 230 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 FBXO7Q9Y3I1 522 aa12.43□□□□□ -0.42
MBD1-207ENST00000398488 SLC25A17O43808 307 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 SLC22A5O76082 557 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 S100A5P33763 92 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 SSBP2P81877 361 aaPredicted RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 PJVKQ0ZLH3 352 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 CNPY1Q3B7I2 92 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 RNF5Q99942 180 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 METTL1Q9UBP6 276 aaKnown RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 CMYA5Q8N3K9 4069 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 RAMP3O60896 148 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 RAB3DO95716 219 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 HLA-DRB1P01911 266 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 TAS2R19P59542 299 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 MSMO1Q15800 293 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 PYDC2Q56P42 97 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 LIN54Q6MZP7 749 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 ZNF66Q6ZN08 573 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 HARBI1Q96MB7 349 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 SDHCQ99643 169 aaPredicted RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 HSD17B10Q99714 261 aaKnown RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 RABL2AQ9UBK7 228 aaPredicted RBP12.42□□□□□ -0.42
MBD1-207ENST00000398488 RABL2BQ9UNT1 228 aa12.42□□□□□ -0.42
MBD1-207ENST00000398488 ANKRD20A5PA0PJZ0 165 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 PGLYRP1O75594 196 aaPredicted RBP12.41□□□□□ -0.42
MBD1-207ENST00000398488 EGR2P11161 476 aaPredicted RBP12.41□□□□□ -0.42
MBD1-207ENST00000398488 ETV6P41212 452 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 CX3CL1P78423 397 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
MBD1-207ENST00000398488 RTL8BQ17RB0 113 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 PHLDA2Q53GA4 152 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 IDO2Q6ZQW0 420 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 CENPVQ7Z7K6 275 aaPredicted RBP12.41□□□□□ -0.42
MBD1-207ENST00000398488 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 STPG2Q8N412 459 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 OR5AU1Q8NGC0 362 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 OR4C16Q8NGL9 310 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 RSRP1Q9BUV0 290 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 SRRQ9GZT4 340 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 KIAA1456Q9P272 454 aa12.41□□□□□ -0.42
MBD1-207ENST00000398488 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 G3V318 75 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
MBD1-207ENST00000398488 SHOXO15266 292 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 ATP6V0E1O15342 81 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 RRASP10301 218 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 PI3P19957 117 aa12.4□□□□□ -0.42
MBD1-207ENST00000398488 TAGLNQ01995 201 aaKnown RBP12.4□□□□□ -0.42
MBD1-207ENST00000398488 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
MBD1-207ENST00000398488 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
MBD1-207ENST00000398488 GPR31O00270 319 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 CA2P00918 260 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 RLN1P04808 185 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 IFNA6P05013 189 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 CSF1P09603 554 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 TBPP20226 339 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 LGALS7P47929 136 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 PPP5CP53041 499 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 UCP3P55916 312 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 KLF9Q13886 244 aaPredicted RBP12.39□□□□□ -0.43
MBD1-207ENST00000398488 SPAG16Q8N0X2 631 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 Q8N402 240 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 ARRDC1Q8N5I2 433 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
MBD1-207ENST00000398488 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 WSB1Q9Y6I7 421 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 VWFP04275 2813 aa12.39□□□□□ -0.43
MBD1-207ENST00000398488 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 AP4M1O00189 453 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 FBXO24O75426 580 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 SPDEFO95238 335 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 IGF1P05019 195 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 AKAIN1P0CW23 69 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
MBD1-207ENST00000398488 CFHR3Q02985 330 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 PLGLAQ15195 96 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 BAK1Q16611 211 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 SCGB2B2Q4G0G5 96 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 OR13C8Q8NGS7 320 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 PARP11Q9NR21 331 aa12.38□□□□□ -0.43
MBD1-207ENST00000398488 PTBP1P26599 531 aaKnown RBP eCLIP12.37□□□□□ -0.43
MBD1-207ENST00000398488 UBE2KP61086 200 aa12.37□□□□□ -0.43
MBD1-207ENST00000398488 CD83Q01151 205 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms