RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 OR8B3Q8NGG8 313 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 CORO2AQ92828 525 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 NEIL1Q96FI4 390 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 OR8B2Q96RD0 313 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 SLC35B3Q9H1N7 401 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 CALYQ9NYX4 217 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 OR2W1Q9Y3N9 320 aa15.92■□□□□ 0.14
PDLIM2-204ENST00000397760 IGSF23A1L1A6 192 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 IFNA4P05014 189 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 CEACAM6P40199 344 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 RHEBQ15382 184 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 TENM4Q6N022 2769 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 DPPA3Q6W0C5 159 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 HSD17B11Q8NBQ5 300 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 OR52L2PQ8NGH6 319 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 EIF5A2Q9GZV4 153 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 LINC00312Q9Y6C7 94 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 IGKV1D-13A0A0B4J2D9 117 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 KBTBD11-OT1A0A1B0GTJ5 212 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 A0A1B0GU03 582 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 FAM24AA6NFZ4 105 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 PGLYRP1O75594 196 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 IGKV1-13P0DP09 117 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 F2RP25116 425 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 PDLIM4P50479 330 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 ATP5J2P56134 94 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 POLR2GP62487 172 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 C17orf58Q2M2W7 97 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 IQCF2Q8IXL9 164 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 SH3BGRL3Q9H299 93 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 UNKLQ9H9P5 680 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 PATZ1Q9HBE1 687 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 RAB9BQ9NP90 201 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 CLN8Q9UBY8 286 aa15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 USP9YO00507 2555 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-204ENST00000397760 AKAP6Q13023 2319 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 MT-ND4LP03901 98 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 KRTAP10-9P60411 292 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 RAB5BP61020 215 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 HTD2P86397 168 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 LTC4SQ16873 150 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 TMEM200BQ69YZ2 307 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 NINJ1Q92982 152 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 CCL28Q9NRJ3 127 aa15.9■□□□□ 0.14
PDLIM2-204ENST00000397760 ZNF729A6NN14 1252 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 OMGP23515 440 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 ATP6V0CP27449 155 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 FAM53AQ6NSI3 398 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 TMEM182Q6ZP80 229 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 OR2G3Q8NGZ4 309 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 IGHV3-43A0A0B4J1X8 118 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 F2RL2O00254 374 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 GPR37O15354 613 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 SSSCA1O60232 199 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 IGHV3-43DP0DP04 118 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 CXorf66Q5JRM2 361 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 WDR25Q64LD2 544 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 HIST2H2BCQ6DN03 193 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 FAM213BQ8TBF2 198 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 PERPQ96FX8 193 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 BPESC1Q9GZL8 116 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 PARP12Q9H0J9 701 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 RPS10P5Q9NQ39 176 aa15.89■□□□□ 0.13
PDLIM2-204ENST00000397760 KIAA2026Q5HYC2 2103 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 C7orf77A4D0Y5 90 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 DFFBO76075 338 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 PAX1P15863 534 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 PPP1CCP36873 323 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 FHITP49789 147 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 AWAT1Q58HT5 328 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 OR10V1Q8NGI7 309 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 LSM10Q969L4 123 aaKnown RBP15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 RAB40CQ96S21 281 aa15.88■□□□□ 0.13
PDLIM2-204ENST00000397760 TRBV23-1A0A0A0MS06 115 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 WRBO00258 174 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 HSD17B6O14756 317 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 OR5C1Q8NGR4 320 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 FAM168AQ92567 244 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 ZNF714Q96N38 554 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 TOLLIPQ9H0E2 274 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 GAL3ST2Q9H3Q3 398 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 LINC00574Q9H8X3 128 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 IDI2-AS1Q9NZ38 188 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 KIAA1456Q9P272 454 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 GNG12Q9UBI6 72 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 JPT1Q9UK76 154 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 RBM7Q9Y580 266 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 CCL3L1P16619 93 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 LOXL3P58215 753 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 GNB2P62879 340 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 CLINT1Q14677 625 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 HIST1H2BAQ96A08 127 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 ATP5SQ99766 215 aa15.87■□□□□ 0.13
PDLIM2-204ENST00000397760 CRYBG3Q68DQ2 2970 aa15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 C1orf196B1AJZ1 125 aa15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 HBE1P02100 147 aa15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 SERPINE2P07093 398 aa15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 RPL23AP62750 156 aaKnown RBP15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 CLEC2AQ6UVW9 174 aa15.86■□□□□ 0.13
PDLIM2-204ENST00000397760 CLCC1Q96S66 551 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms