RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 IFT46Q9NQC8 304 aa12.42□□□□□ -0.42
CUX2-202ENST00000397643 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
CUX2-202ENST00000397643 TRDCB7Z8K6 153 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 CTDSPLO15194 276 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 TXNL1O43396 289 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 IGHV4-30-4P0DP06 118 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 IL3RAP26951 378 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 ETV6P41212 452 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 RAB9AP51151 201 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 ZNF134P52741 427 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 HLA-DRB3P79483 266 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 HMGN3Q15651 99 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 Q3ZCU0 254 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 Q6ZS49 121 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 PRR18Q8N4B5 295 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 FCAMRQ8WWV6 532 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 C19orf73Q9NVV2 129 aa12.41□□□□□ -0.42
CUX2-202ENST00000397643 ZNF230Q9UIE0 474 aaPredicted RBP12.41□□□□□ -0.42
CUX2-202ENST00000397643 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 GABARAPH6UMI1 98 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 HBZP02008 142 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 LSAMPQ13449 338 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 MMDQ15546 238 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 C19orf54Q5BKX5 351 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 HOGA1Q86XE5 327 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 MINDY2Q8NBR6 621 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 MAFIPQ8WZ33 124 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 GALMQ96C23 342 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 RITA1Q96K30 269 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 V9GYH0 126 aa12.4□□□□□ -0.42
CUX2-202ENST00000397643 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 A0A087WW49 117 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 MEIS3P1A6NDR6 274 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 A8MZ25 164 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 LINC01619G3V211 115 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 FABP7O15540 132 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 SOX15O60248 233 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 RBBP9O75884 186 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 CNTFRP26992 372 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 NDPQ00604 133 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 ZNF45Q02386 682 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 RNASE12Q5GAN4 147 aaKnown RBP12.39□□□□□ -0.43
CUX2-202ENST00000397643 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 BEST4Q8NFU0 473 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 OR52I2Q8NH67 350 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 OR1L1Q8NH94 360 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 CT45A3Q8NHU0 189 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 PARP11Q9NR21 331 aa12.39□□□□□ -0.43
CUX2-202ENST00000397643 TNCP24821 2201 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 GSTZ1O43708 216 aaPredicted RBP12.38□□□□□ -0.43
CUX2-202ENST00000397643 SCTP09683 121 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 CTXN2P0C2S0 81 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 OR8U9P0C7N5 309 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 RCVRNP35243 200 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 ACTBP60709 375 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 HTD2P86397 168 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 STEAP3Q658P3 488 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 GVQW1Q8N7I0 195 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 ANXA10Q9UJ72 324 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 ANAPC10Q9UM13 185 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
CUX2-202ENST00000397643 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 LANCL1O43813 399 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 FCER2P06734 321 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
CUX2-202ENST00000397643 GSTT2P0CG29 244 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 GSTT2BP0CG30 244 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 ARPC4P59998 168 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 SSBP1Q04837 148 aaKnown RBP12.37□□□□□ -0.43
CUX2-202ENST00000397643 GHITMQ9H3K2 345 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 OR2S2Q9NQN1 319 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 JPT1Q9UK76 154 aa12.37□□□□□ -0.43
CUX2-202ENST00000397643 IGKV1D-8A0A087WSZ0 117 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 HSPA12AO43301 675 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 RGS11O94810 467 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 DIRAS3O95661 229 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 NAT1P18440 290 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 ZBTB25P24278 435 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
CUX2-202ENST00000397643 ZNF79Q15937 498 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 Q8N402 240 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
CUX2-202ENST00000397643 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 329.9 ms