RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 LEUTXA8MZ59 168 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 HPRT1P00492 218 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 GATA3P23771 443 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 IAH1Q2TAA2 248 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-203ENST00000397442 TPTE2P1Q5T6R2 138 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 OR4S2Q8NH73 311 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 NMES1Q9C002 83 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 SLC35D1Q9NTN3 355 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 AUP1Q9Y679 476 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 ZANQ9Y493 2812 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 CENPVL3A0A0U1RRI6 287 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 GAPDHP04406 335 aaKnown RBP22.23■■□□□ 1.15
CPNE1-203ENST00000397442 IGKV1-16P04430 117 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 HNRNPCP07910 306 aaKnown RBP eCLIP22.23■■□□□ 1.157e-7■■■□□ 17.1
CPNE1-203ENST00000397442 LSM10Q969L4 123 aaKnown RBP22.23■■□□□ 1.15
CPNE1-203ENST00000397442 RPEQ96AT9 228 aa22.23■■□□□ 1.15
CPNE1-203ENST00000397442 CREBBPQ92793 2442 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 IGHV1-3A0A0C4DH29 117 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 KRASP01116 189 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 P0C879 139 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 G6PCP35575 357 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 GPR146Q96CH1 333 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 C7orf69Q9H7B7 122 aa22.22■■□□□ 1.15
CPNE1-203ENST00000397442 A0A1W2PPI3 338 aa22.21■■□□□ 1.15
CPNE1-203ENST00000397442 CRYZL1O95825 349 aa22.21■■□□□ 1.15
CPNE1-203ENST00000397442 IZUMO4Q1ZYL8 232 aa22.21■■□□□ 1.15
CPNE1-203ENST00000397442 AJUBAQ96IF1 538 aa22.21■■□□□ 1.15
CPNE1-203ENST00000397442 TXNL1O43396 289 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 AKR1C2P52895 323 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 TAGLNQ01995 201 aaKnown RBP22.2■■□□□ 1.15
CPNE1-203ENST00000397442 RTL8BQ17RB0 113 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 MINOS1Q5TGZ0 78 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 Q6ZRM9 215 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 CIARTQ8N365 385 aaPredicted RBP22.2■■□□□ 1.15
CPNE1-203ENST00000397442 ZBTB8BQ8NAP8 495 aaPredicted RBP22.2■■□□□ 1.15
CPNE1-203ENST00000397442 C17orf50Q8WW18 174 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 RANBP3Q9H6Z4 567 aaPredicted RBP22.2■■□□□ 1.15
CPNE1-203ENST00000397442 COMMD9Q9P000 198 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 MINOS1-NBL1R4GNA1 71 aa22.2■■□□□ 1.15
CPNE1-203ENST00000397442 SVEP1Q4LDE5 3571 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 TGFAP01135 160 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 APOA2P02652 100 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 C1QBP02746 253 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 CEACAM3P40198 252 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 CYCSP99999 105 aaKnown RBP22.2■■□□□ 1.14
CPNE1-203ENST00000397442 DHRS7BQ6IAN0 325 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-203ENST00000397442 DYNAPQ8N1N2 210 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 PPP1R1CQ8WVI7 109 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 R3HDM4Q96D70 268 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 GSKIPQ9P0R6 139 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 HILPDAQ9Y5L2 63 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 MMP24Q9Y5R2 645 aa22.2■■□□□ 1.14
CPNE1-203ENST00000397442 MARCH11A6NNE9 402 aa22.19■■□□□ 1.14
CPNE1-203ENST00000397442 AVPP01185 164 aa22.19■■□□□ 1.14
CPNE1-203ENST00000397442 RRASP10301 218 aa22.19■■□□□ 1.14
CPNE1-203ENST00000397442 GZMKP49863 264 aa22.19■■□□□ 1.14
CPNE1-203ENST00000397442 RRNAD1Q96FB5 475 aaKnown RBP22.19■■□□□ 1.14
CPNE1-203ENST00000397442 TBL2Q9Y4P3 447 aaKnown RBP22.19■■□□□ 1.14
CPNE1-203ENST00000397442 TRAV14DV4A0A0A6YYC5 116 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 LGALS4P56470 323 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 ZFP69Q49AA0 526 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 PDPNQ86YL7 162 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 FAM219AQ8IW50 185 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 PIP4P2Q8N4L2 257 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 OR11H4Q8NGC9 324 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 WASHC3Q9Y3C0 194 aa22.18■■□□□ 1.14
CPNE1-203ENST00000397442 IGHV3-72A0A0B4J1Y9 119 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 ATG12O94817 140 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 SLC25A6P12236 298 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 EPHA1P21709 976 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 PAX6P26367 422 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 MC5RP33032 325 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 MIDNQ504T8 468 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 MOB3BQ86TA1 216 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 VKORC1L1Q8N0U8 176 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 OR4D5Q8NGN0 318 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 RNASE11Q8TAA1 199 aaKnown RBP22.17■■□□□ 1.14
CPNE1-203ENST00000397442 TRAV40A0A0B4J280 105 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 A0A1B0GU03 582 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 H7C2Y5 167 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 NPFFO15130 113 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 NQO2P16083 231 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 SAA4P35542 130 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 TMEM177Q53S58 311 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 SPIN2AQ99865 258 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 SPIN2BQ9BPZ2 258 aa22.17■■□□□ 1.14
CPNE1-203ENST00000397442 CELSR1Q9NYQ6 3014 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 AKAP9Q99996 3911 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 IGHV1-69DA0A0B4J2H0 117 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 SRRM4A7MD48 611 aaKnown RBP22.16■■□□□ 1.14
CPNE1-203ENST00000397442 PITX3O75364 302 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 IGHV1-69P01742 117 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 HABP2Q14520 560 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-203ENST00000397442 SSX2Q16385 188 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 LRRC37A5PQ49AS3 106 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 OR8H3Q8N146 312 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 CFHR4Q92496 578 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 CACNG5Q9UF02 275 aa22.16■■□□□ 1.14
CPNE1-203ENST00000397442 ZNF469Q96JG9 3925 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-203ENST00000397442 OOSP1A8MZH6 123 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms