RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 UQCC2Q9BRT2 126 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 FAAP24Q9BTP7 215 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 SLC35D1Q9NTN3 355 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF221Q9UK13 617 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
NEDD9-203ENST00000397378 EI24O14681 340 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 RTL8CO15255 209 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 SPRY2O43597 315 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 TUSC2O75896 110 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 CDK2AP2O75956 126 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 DCKP27707 260 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 RANBP1P43487 201 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 ETV1P50549 477 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 ATP5G2Q06055 141 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 MRGPRG-AS1Q2M3A8 158 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 ANKRD55Q3KP44 614 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 TMEM61Q8N0U2 210 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 Q8N1X5 172 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 GVQW1Q8N7I0 195 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 NKAIN3Q8N8D7 197 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 OR52B4Q8NGK2 314 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 THRSPQ92748 146 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 PGLYRP3Q96LB9 341 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 HARBI1Q96MB7 349 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 PHB2Q99623 299 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 SLC29A1Q99808 456 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 RIMS4Q9H426 269 aaPredicted RBP7□□□□□ -1.29
NEDD9-203ENST00000397378 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 OR1A1Q9P1Q5 309 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 FBXL17Q9UF56 701 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 MGAT4AQ9UM21 535 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 DMRT1Q9Y5R6 373 aa7□□□□□ -1.29
NEDD9-203ENST00000397378 UBE2CO00762 179 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 GGCTO75223 188 aaKnown RBP6.99□□□□□ -1.29
NEDD9-203ENST00000397378 LALBAP00709 142 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 IFNA4P05014 189 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 S100A6P06703 90 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 UBBP0CG47 229 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 APELAP0DMC3 54 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 EDN2P20800 178 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 CBLN1P23435 193 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 MAP2K4P45985 399 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 HLA-DRB3P79483 266 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 TAGLNQ01995 201 aaKnown RBP6.99□□□□□ -1.29
NEDD9-203ENST00000397378 TMEM177Q53S58 311 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 C1orf146Q5VVC0 180 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 ZNF57Q68EA5 555 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-203ENST00000397378 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 NECAP1Q8NC96 275 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 C2CD4CQ8TF44 421 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 DERL3Q96Q80 235 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 TM2D1Q9BX74 207 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 CHMP1AQ9HD42 196 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-203ENST00000397378 PKD1P98161 4303 aa6.99□□□□□ -1.29
NEDD9-203ENST00000397378 DMBT1Q9UGM3 2413 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 A0A1W2PPK0 400 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 SRRM4A7MD48 611 aaKnown RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 A8MWP6 167 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 M0R1X1 148 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 CASQ2O14958 399 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 SHOXO15266 292 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 HTR2CP28335 458 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 APOC4P55056 127 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 TCTAP57738 103 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 RPS27AP62979 156 aaKnown RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 RBMS2Q15434 407 aaKnown RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 DEFB135Q30KP9 77 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 GLT8D1Q68CQ7 371 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 LILRB2Q8N423 598 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 LINC00469Q8N7U9 141 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 TEX45Q8NA69 505 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 SETD6Q8TBK2 473 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 APH1BQ8WW43 257 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 SRSF12Q8WXF0 261 aaKnown RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 TMEM59Q9BXS4 323 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 MLXQ9UH92 298 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 EXOSC1Q9Y3B2 195 aaKnown RBP6.98□□□□□ -1.29
NEDD9-203ENST00000397378 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
NEDD9-203ENST00000397378 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 KIR2DL5BA0A0G2JN68 375 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 KIR2DL5BA0A0G2JPC4 375 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 LOC100130705A0A1B0GUX0 176 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 IRGMA1A4Y4 181 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 TMEM213A2RRL7 107 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 C16orf90A8MZG2 172 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 PPP5D1E7EU14 171 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 M0R2N4 97 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 MPPED1O15442 326 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 OR2C1O95371 312 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 PRH1P02810 166 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 SCTP09683 121 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 RRASP10301 218 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 NANOS2P60321 138 aaKnown RBP6.97□□□□□ -1.29
NEDD9-203ENST00000397378 UBE2KP61086 200 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 CBX3Q13185 183 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 TNXAQ16473 311 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 PRSS8Q16651 343 aa6.97□□□□□ -1.29
NEDD9-203ENST00000397378 RTL8BQ17RB0 113 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms