RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 TMEM17Q86X19 198 aa16.49■□□□□ 0.23
SEC13-207ENST00000397105 MFSD4AQ8N468 514 aa16.49■□□□□ 0.23
SEC13-207ENST00000397105 HARBI1Q96MB7 349 aa16.49■□□□□ 0.23
SEC13-207ENST00000397105 OR51J1Q9H342 316 aa16.49■□□□□ 0.23
SEC13-207ENST00000397105 IGHV7-81A0A0B4J1V7 117 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 FABP12A6NFH5 140 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 CTDSPLO15194 276 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 CRYZL1O95825 349 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 IFNA6P05013 189 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 TBPP20226 339 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 RPL30P62888 115 aaKnown RBP16.48■□□□□ 0.23
SEC13-207ENST00000397105 DGCR2P98153 550 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 CD83Q01151 205 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 SSBP1Q04837 148 aaKnown RBP16.48■□□□□ 0.23
SEC13-207ENST00000397105 VAX1Q5SQQ9 334 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 NDUFA11Q86Y39 141 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 OSR1Q8TAX0 266 aaPredicted RBP16.48■□□□□ 0.23
SEC13-207ENST00000397105 TCTEX1D2Q8WW35 142 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 CITED2Q99967 270 aaPredicted RBP16.48■□□□□ 0.23
SEC13-207ENST00000397105 ZNF580Q9UK33 172 aa16.48■□□□□ 0.23
SEC13-207ENST00000397105 PKD1L1Q8TDX9 2849 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 FCN1O00602 326 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 SLC25A17O43808 307 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 OPN1MWP04001 364 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 VDAC1P21796 283 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 GNRHRP30968 328 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 S100A5P33763 92 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 C10orf99Q6UWK7 81 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 ZNF818PQ6ZRF7 136 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 COMMD1Q8N668 190 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 CLCC1Q96S66 551 aa16.47■□□□□ 0.23
SEC13-207ENST00000397105 M0QYG6 137 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 TNFSF12O43508 249 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 IGLV2-23P01705 113 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 CSF1P09603 554 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 KIR2DS2P43631 304 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 TAS2R19P59542 299 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 CX3CL1P78423 397 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 NSUN5P1Q3KNT7 163 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 RNASE10Q5GAN6 216 aaKnown RBP16.46■□□□□ 0.23
SEC13-207ENST00000397105 OR2B11Q5JQS5 317 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 TCTEX1D4Q5JR98 221 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 PPP1R27Q86WC6 154 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 TMEM229BQ8NBD8 167 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 OR4S2Q8NH73 311 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 SMIM4Q8WVI0 70 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 SOSTQ9BQB4 213 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 PARP11Q9NR21 331 aa16.46■□□□□ 0.23
SEC13-207ENST00000397105 DPPA5A6NC42 116 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 SRRM4A7MD48 611 aaKnown RBP16.45■□□□□ 0.22
SEC13-207ENST00000397105 CD3DP04234 171 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 UBE2KP61086 200 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 CATR1Q13166 79 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 VMA21Q3ZAQ7 101 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 LPCAT3Q6P1A2 487 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 TEX38Q6PEX7 206 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 ZNF562Q6V9R5 426 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 CMTM1Q8IZ96 169 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 GPHA2Q96T91 129 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 TINAGL1Q9GZM7 467 aaPredicted RBP16.45■□□□□ 0.22
SEC13-207ENST00000397105 TSSC4Q9Y5U2 329 aaPredicted RBP16.45■□□□□ 0.22
SEC13-207ENST00000397105 VWFP04275 2813 aa16.45■□□□□ 0.22
SEC13-207ENST00000397105 ATP6V0E1O15342 81 aa16.44■□□□□ 0.22
SEC13-207ENST00000397105 CA2P00918 260 aa16.44■□□□□ 0.22
SEC13-207ENST00000397105 CRYGBP07316 175 aa16.44■□□□□ 0.22
SEC13-207ENST00000397105 ARRDC1Q8N5I2 433 aa16.44■□□□□ 0.22
SEC13-207ENST00000397105 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
SEC13-207ENST00000397105 GSTZ1O43708 216 aaPredicted RBP16.43■□□□□ 0.22
SEC13-207ENST00000397105 CD74P04233 296 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 AADACL3Q5VUY0 350 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 STEAP1BQ6NZ63 245 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 TREML4Q6UXN2 200 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 SPAG16Q8N0X2 631 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 POC5Q8NA72 575 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 ABHD5Q8WTS1 349 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 FXYD6Q9H0Q3 95 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 TPSG1Q9NRR2 321 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 WSB1Q9Y6I7 421 aa16.43■□□□□ 0.22
SEC13-207ENST00000397105 MGAM2Q2M2H8 2515 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 TRAV41A0A0B4J266 112 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 GPR31O00270 319 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 PGLYRP1O75594 196 aaPredicted RBP16.42■□□□□ 0.22
SEC13-207ENST00000397105 CNIH1O95406 144 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 RAB3DO95716 219 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 S100GP29377 79 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 BRWD1-AS2P59051 145 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 CFHR3Q02985 330 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 TMEM267Q0VDI3 215 aaPredicted RBP16.42■□□□□ 0.22
SEC13-207ENST00000397105 KHDC1LQ5JSQ8 128 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 SLC38A6Q8IZM9 456 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 OR4F17Q8NGA8 305 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 ZFP57Q9NU63 452 aa16.42■□□□□ 0.22
SEC13-207ENST00000397105 A0A1W2PRX2 142 aa16.41■□□□□ 0.22
SEC13-207ENST00000397105 ADARB2-AS1A8MUL3 147 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms