RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.1□□□□□ -0.15
FXN-203ENST00000396366 RRP15Q9Y3B9 282 aaKnown RBP14.1□□□□□ -0.15
FXN-203ENST00000396366 SORL1Q92673 2214 aa14.1□□□□□ -0.15
FXN-203ENST00000396366 TMEM235A6NFC5 223 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 SHOXO15266 292 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 HSPB1P04792 205 aaKnown RBP14.09□□□□□ -0.15
FXN-203ENST00000396366 APELAP0DMC3 54 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 DUTP33316 252 aaKnown RBP14.09□□□□□ -0.15
FXN-203ENST00000396366 SDC2P34741 201 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 INSL3P51460 131 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 MXD1Q05195 221 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 DCTN2Q13561 401 aaKnown RBP14.09□□□□□ -0.15
FXN-203ENST00000396366 HACD4Q5VWC8 232 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 ZNF429Q86V71 674 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 TPRA1Q86W33 373 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 LGALS14Q8TCE9 139 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 FCGR1BQ92637 280 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 YTHDF1Q9BYJ9 559 aaKnown RBP14.09□□□□□ -0.15
FXN-203ENST00000396366 Q9H521 79 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 SLA2Q9H6Q3 261 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 SSR3Q9UNL2 185 aa14.09□□□□□ -0.15
FXN-203ENST00000396366 SSX5O60225 188 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 NFYAP23511 347 aaPredicted RBP14.08□□□□□ -0.16
FXN-203ENST00000396366 DTYMKP23919 212 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 CD40LGP29965 261 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 SFXN4Q6P4A7 337 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 IDO2Q6ZQW0 420 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 POC5Q8NA72 575 aa14.08□□□□□ -0.16
FXN-203ENST00000396366 HUWE1Q7Z6Z7 4374 aaKnown RBP14.08□□□□□ -0.16
FXN-203ENST00000396366 CRYZL1O95825 349 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 SPNP16150 400 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 RTL8BQ17RB0 113 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 ACSM6Q6P461 480 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 HAPLN4Q86UW8 402 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 OR5H6Q8NGV6 325 aa14.07□□□□□ -0.16
FXN-203ENST00000396366 TNCP24821 2201 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 IGKV1D-13A0A0B4J2D9 117 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 LOC100506127A0A0U1RQW1 187 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 ANKRD34BA5PLL1 514 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 MSGN1A6NI15 193 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 IGLV2-14P01704 120 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 IGKV1-13P0DP09 117 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 RPL30P62888 115 aaKnown RBP14.06□□□□□ -0.16
FXN-203ENST00000396366 TAGLNQ01995 201 aaKnown RBP14.06□□□□□ -0.16
FXN-203ENST00000396366 CBX3Q13185 183 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 ARL6IP1Q15041 203 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 NEDD8Q15843 81 aa14.06□□□□□ -0.16
FXN-203ENST00000396366 C13orf42A0A1B0GVH6 325 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 RBMXL2O75526 392 aaKnown RBP14.05□□□□□ -0.16
FXN-203ENST00000396366 HLA-DQB1P01920 261 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 NHLRC4P0CG21 123 aaPredicted RBP14.05□□□□□ -0.16
FXN-203ENST00000396366 RRASP10301 218 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 PTHLHP12272 177 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 GNG2P59768 71 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 UBE2KP61086 200 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 PRSS8Q16651 343 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 OR2B11Q5JQS5 317 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 ZNF645Q8N7E2 425 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 TEX45Q8NA69 505 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 ADTRPQ96IZ2 230 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 CENPOQ9BU64 300 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 DCSTAMPQ9H295 470 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 RHBDL2Q9NX52 303 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 OR2W1Q9Y3N9 320 aa14.05□□□□□ -0.16
FXN-203ENST00000396366 FCGR3BO75015 233 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 TUSC2O75896 110 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 PITPNAQ00169 270 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 TNXAQ16473 311 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 IDNKQ5T6J7 187 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 SLC25A38Q96DW6 304 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 WWC2-AS2Q96NR7 200 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 PHB2Q99623 299 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 TINAGL1Q9GZM7 467 aaPredicted RBP14.04□□□□□ -0.16
FXN-203ENST00000396366 ANXA10Q9UJ72 324 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 ADAM30Q9UKF2 790 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 U3KQK5 164 aa14.04□□□□□ -0.16
FXN-203ENST00000396366 TRAV18A0A075B6X5 111 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 H3BUA1 57 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 TRBV12-3P01733 135 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 CTXN2P0C2S0 81 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 CD36P16671 472 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 TGFBR1P36897 503 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 VMA21Q3ZAQ7 101 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 VKORC1L1Q8N0U8 176 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 OR4C12Q96R67 309 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 GPHA2Q96T91 129 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 ZNF430Q9H8G1 570 aaPredicted RBP14.03□□□□□ -0.16
FXN-203ENST00000396366 RANGRFQ9HD47 186 aaPredicted RBP14.03□□□□□ -0.16
FXN-203ENST00000396366 COA4Q9NYJ1 87 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 RBMX2Q9Y388 322 aaKnown RBP14.03□□□□□ -0.16
FXN-203ENST00000396366 SMAD5-AS1Q9Y6J3 95 aa14.03□□□□□ -0.16
FXN-203ENST00000396366 TRIM64CA6NLI5 447 aa14.02□□□□□ -0.17
FXN-203ENST00000396366 PRH1P02810 166 aa14.02□□□□□ -0.17
FXN-203ENST00000396366 FCER2P06734 321 aa14.02□□□□□ -0.17
FXN-203ENST00000396366 SAA1P0DJI8 122 aaPredicted RBP14.02□□□□□ -0.17
FXN-203ENST00000396366 GP9P14770 177 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms