RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 A0A0B4J203 849 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 APOA2P02652 100 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 SRMP19623 302 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 HTR2CP28335 458 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 CEACAM6P40199 344 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 MLLT11Q13015 90 aaPredicted RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 TPBGQ13641 420 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 EXOSC2Q13868 293 aaKnown RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 GLT8D1Q68CQ7 371 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 EDARADDQ8WWZ3 215 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 MGLLQ99685 303 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 NICN1Q9BSH3 213 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 KCNK15Q9H427 330 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 AKIP1Q9NQ31 210 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
SNCA-205ENST00000394991 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
SNCA-205ENST00000394991 A0A0J9YWU9 116 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 C2orf70A6NJV1 201 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
SNCA-205ENST00000394991 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 ZNF45Q02386 682 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 TRAM1Q15629 374 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 LRRTM1Q86UE6 522 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 PHYHIPQ92561 330 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 PTX4Q96A99 478 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 GGTLC1Q9BX51 225 aa11.85□□□□□ -0.51
SNCA-205ENST00000394991 RRP15Q9Y3B9 282 aaKnown RBP11.85□□□□□ -0.51
SNCA-205ENST00000394991 TRBV6-6A0A0A6YYG2 114 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 M0R1X1 148 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 PRH1P02810 166 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 UCHL1P09936 223 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 OR9G9P0C7N8 305 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 FOLR2P14207 255 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 RHOGP84095 191 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 TMEM91Q6ZNR0 172 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 GHRLQ9UBU3 117 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 DMRT1Q9Y5R6 373 aa11.84□□□□□ -0.51
SNCA-205ENST00000394991 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.52
SNCA-205ENST00000394991 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
SNCA-205ENST00000394991 DENRO43583 198 aaKnown RBP11.83□□□□□ -0.52
SNCA-205ENST00000394991 SCTP09683 121 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 ZBTB25P24278 435 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 PSMA1P25786 263 aaKnown RBP11.83□□□□□ -0.52
SNCA-205ENST00000394991 GABARAPL2P60520 117 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 UNC119Q13432 240 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 TBCEQ15813 527 aaPredicted RBP11.83□□□□□ -0.52
SNCA-205ENST00000394991 CACNG8Q8WXS5 425 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 HARBI1Q96MB7 349 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 PHB2Q99623 299 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 TM2D1Q9BX74 207 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 TMEM59Q9BXS4 323 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 ACOT13Q9NPJ3 140 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 ZNF221Q9UK13 617 aa11.83□□□□□ -0.52
SNCA-205ENST00000394991 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
SNCA-205ENST00000394991 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 PPP5D1E7EU14 171 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 ARL6IP5O75915 188 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
SNCA-205ENST00000394991 UBBP0CG47 229 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 FABP5Q01469 135 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 LYG2Q86SG7 212 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 PLGRKTQ9HBL7 147 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
SNCA-205ENST00000394991 AK3Q9UIJ7 227 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 AK6Q9Y3D8 172 aaKnown RBP11.82□□□□□ -0.52
SNCA-205ENST00000394991 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
SNCA-205ENST00000394991 TRBV9A0A0B4J1U6 114 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 CALRP27797 417 aaKnown RBP11.81□□□□□ -0.52
SNCA-205ENST00000394991 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 P2RY14Q15391 338 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 C1orf100Q5SVJ3 147 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 SLC16A13Q7RTY0 426 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 WFDC3Q8IUB2 231 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 SRSF12Q8WXF0 261 aaKnown RBP11.81□□□□□ -0.52
SNCA-205ENST00000394991 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
SNCA-205ENST00000394991 RDH8Q9NYR8 311 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 RYR1P21817 5038 aa11.81□□□□□ -0.52
SNCA-205ENST00000394991 MRPS14O60783 128 aaKnown RBP11.8□□□□□ -0.52
SNCA-205ENST00000394991 QRFPP83859 136 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 SSX1Q16384 188 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 TNXAQ16473 311 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 PRSS8Q16651 343 aa11.8□□□□□ -0.52
SNCA-205ENST00000394991 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms