RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 LDLRAD3Q86YD5 345 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 DOK5Q9P104 306 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 TANC2Q9HCD6 1990 aa13.25□□□□□ -0.29
SMARCD1-202ENST00000394963 CCL20P78556 96 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 MUC15Q8N387 334 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 NAV2Q8IVL1 2488 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 K7ENP7 123 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 SLC25A6P12236 298 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 SULT1A1P50225 295 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 FFAR4Q5NUL3 377 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 SLC35E4Q6ICL7 350 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 COMMD5Q9GZQ3 224 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 LYRM2Q9NU23 88 aaPredicted RBP13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 PRSS44E7EML9 344 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 TAGLN2P37802 199 aaKnown RBP13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 ANAPC10Q9UM13 185 aa13.24□□□□□ -0.29
SMARCD1-202ENST00000394963 A0A1B0GU03 582 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 FGF2P09038 288 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 RPS10P46783 165 aaKnown RBP13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 ADIRFQ15847 76 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 SRRM5B3KS81 715 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 MMP23AO75900 390 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 CGAP01215 116 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 REG1AP05451 166 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 ATP5SQ99766 215 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 TMPRSS5Q9H3S3 457 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 SULT1A2P50226 295 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 ADIPOQQ15848 244 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 LYPD2Q6UXB3 125 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 MS4A5Q9H3V2 200 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 HILPDAQ9Y5L2 63 aa13.23□□□□□ -0.29
SMARCD1-202ENST00000394963 APOA2P02652 100 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 ARF6P62330 175 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 TNFRSF9Q07011 255 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 IGFL3Q6UXB1 125 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 MRGPRGQ86SM5 289 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 CACFD1Q9UGQ2 172 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 HSPB1P04792 205 aaKnown RBP13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 KITLGP21583 273 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 CHRNB4P30926 498 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 CDKN1AP38936 164 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 Q8NA96 180 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 OR4F5Q8NH21 305 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 LRBAP50851 2863 aa13.22□□□□□ -0.29
SMARCD1-202ENST00000394963 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 TOX4O94842 621 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ADH4P08319 380 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 SMUG1Q53HV7 270 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 FAM24BQ8N5W8 94 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 OR4D5Q8NGN0 318 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 HARBI1Q96MB7 349 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 TMEM56Q96MV1 263 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 REG4Q9BYZ8 158 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ZDHHC8Q9ULC8 765 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 CNIH1O95406 144 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 IGKV1-39P01597 117 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 IGKV1D-39P04432 117 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ERVK11-1P61568 191 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF273Q14593 569 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF585BQ52M93 769 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 RPRMQ9NS64 109 aa13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.29
SMARCD1-202ENST00000394963 ZNF727A8MUV8 499 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 J3QW42 95 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 RTL8BQ17RB0 113 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 MORN2Q502X0 79 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 C4orf17Q53FE4 359 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 TMEM140Q9NV12 185 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 AUP1Q9Y679 476 aa13.21□□□□□ -0.3
SMARCD1-202ENST00000394963 SSTP61278 116 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 TMEM106BQ9NUM4 274 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 NAV3Q8IVL0 2385 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 MAP1LC3B2A6NCE7 125 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 MDKP21741 143 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 DVL1P1P54792 670 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 HSD17B10Q99714 261 aaKnown RBP13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 MAP1LC3BQ9GZQ8 125 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 A0A1W2PPE2 198 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 K7N7A8 449 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 DVL1O14640 695 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 NQO2P16083 231 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 CCKARP32238 428 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 ARL16Q0P5N6 197 aa13.2□□□□□ -0.3
SMARCD1-202ENST00000394963 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
SMARCD1-202ENST00000394963 CEACAM4O75871 244 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms