RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PMS2P11Q13670 270 aa12.72□□□□□ -0.37
UBE2D3-207ENST00000394801 SDSLQ96GA7 329 aa12.72□□□□□ -0.37
UBE2D3-207ENST00000394801 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-207ENST00000394801 LOC102723971A0A1B0GUV8 181 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 A0A1W2PR64 198 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 A0A1W2PRV1 198 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 ZG16O60844 167 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 HPRT1P00492 218 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 TMEM41BQ5BJD5 291 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 OR8G2PQ6IF36 304 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 FAM24BQ8N5W8 94 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 NUP37Q8NFH4 326 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 GCM1Q9NP62 436 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 RNF7Q9UBF6 113 aa12.71□□□□□ -0.37
UBE2D3-207ENST00000394801 IFNA17P01571 189 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 BMP5P22003 454 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 TDGF1P3P51864 188 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF134P52741 427 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 LTC4SQ16873 150 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 R3HDM4Q96D70 268 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 CALYQ9NYX4 217 aa12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 PUS1Q9Y606 427 aaKnown RBP eCLIP12.71□□□□□ -0.38
UBE2D3-207ENST00000394801 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 H3BQ15 152 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 LY86O95711 162 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 CD55P08174 381 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 DAOP14920 347 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 GNB2P62879 340 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 VWC2Q2TAL6 325 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 DOLPP1Q86YN1 238 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 Q8TCH9 128 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 ABHD17AQ96GS6 310 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 TMEM147Q9BVK8 224 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 CCKARP32238 428 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 EDDM3BP56851 147 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 STUMQ69YW2 141 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF787Q6DD87 383 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 CYB561D1Q8N8Q1 229 aa12.7□□□□□ -0.38
UBE2D3-207ENST00000394801 DSCAMO60469 2012 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 PRRG2O14669 202 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 SSX7Q7RTT5 188 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 ELOVL5Q9NYP7 299 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 DMRT1Q9Y5R6 373 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 CACNA1AO00555 2505 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 PLCE1Q9P212 2302 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 FCGR3BO75015 233 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 ARG1P05089 322 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 BCL2P10415 239 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 OR2B8PP59922 312 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 LCN15Q6UWW0 184 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF429Q86V71 674 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 GNG13Q9P2W3 67 aa12.69□□□□□ -0.38
UBE2D3-207ENST00000394801 A0A087WWC5 75 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 A0A0G2JNJ9 132 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 M0R1X1 148 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 OR9G9P0C7N8 305 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 TNFSF4P23510 183 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 RAB7AP51149 207 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 DDB2Q92466 427 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 YPEL4Q96NS1 127 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 FAM234AQ9H0X4 552 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF665Q9H7R5 613 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 LINC00574Q9H8X3 128 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 Q9UFV3 132 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 BSNQ9UPA5 3926 aa12.68□□□□□ -0.38
UBE2D3-207ENST00000394801 A0A1W2PPE2 198 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 ZNF729A6NN14 1252 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 CEBPZOSA8MTT3 80 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 HOXA5P20719 270 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 SLC35E3Q7Z769 313 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 RAB39BQ96DA2 213 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 P2RX4Q99571 388 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 GGACTQ9BVM4 153 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 QTRT1Q9BXR0 403 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 DOCK11Q5JSL3 2073 aa12.67□□□□□ -0.38
UBE2D3-207ENST00000394801 DSCAML1Q8TD84 2053 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms