RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TAS2R8Q9NYW2 309 aa14.98□□□□□ -0.01
PDLIM7-204ENST00000393546 A3GALT2U3KPV4 340 aa14.98□□□□□ -0.01
PDLIM7-204ENST00000393546 IGHV7-81A0A0B4J1V7 117 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 TCRBV4S1A1TA0A5B7 111 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 CTDSPLO15194 276 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 SLC25A17O43808 307 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 FCGR3BO75015 233 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 CRYZL1O95825 349 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 IFNA6P05013 189 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 IGF1P05019 195 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 S100A5P33763 92 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 DGCR2P98153 550 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 CD83Q01151 205 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 SSBP1Q04837 148 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 EIF4EBP1Q13541 118 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 C2orf68Q2NKX9 166 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 PRR31Q5SQ13 230 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 VAX1Q5SQQ9 334 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 HIST2H2BDQ6DRA6 164 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 ZNF329Q86UD4 541 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 OSR1Q8TAX0 266 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 CLCC1Q96S66 551 aa14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 CITED2Q99967 270 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-204ENST00000393546 M0QYG6 137 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 FCN1O00602 326 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 TNFSF12O43508 249 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 OPN1MWP04001 364 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 CSF1P09603 554 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 OPN1MW2P0DN77 364 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 OPN1MW3P0DN78 364 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 TBPP20226 339 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 VDAC1P21796 283 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 GNRHRP30968 328 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 CX3CL1P78423 397 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 NSUN5P1Q3KNT7 163 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 RNASE10Q5GAN6 216 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 LPCAT3Q6P1A2 487 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 C10orf99Q6UWK7 81 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 ZNF818PQ6ZRF7 136 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 NDUFA11Q86Y39 141 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 COMMD1Q8N668 190 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 TMEM229BQ8NBD8 167 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 SMIM4Q8WVI0 70 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 PARP11Q9NR21 331 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 ZNF580Q9UK33 172 aa14.96□□□□□ -0.01
PDLIM7-204ENST00000393546 DPPA5A6NC42 116 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 SRRM4A7MD48 611 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 IGLV2-23P01705 113 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 CD3DP04234 171 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 KIR2DS2P43631 304 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 TAS2R19P59542 299 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 CATR1Q13166 79 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 VMA21Q3ZAQ7 101 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 OR2B11Q5JQS5 317 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 ZNF562Q6V9R5 426 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 PPP1R27Q86WC6 154 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 OR4S2Q8NH73 311 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 GPHA2Q96T91 129 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 SOSTQ9BQB4 213 aa14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 TSSC4Q9Y5U2 329 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-204ENST00000393546 PLXNB1O43157 2135 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 CRYGBP07316 175 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 TCTEX1D4Q5JR98 221 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 TEX38Q6PEX7 206 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 CMTM1Q8IZ96 169 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 TEX45Q8NA69 505 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 ABHD5Q8WTS1 349 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 TINAGL1Q9GZM7 467 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 WSB1Q9Y6I7 421 aa14.94□□□□□ -0.02
PDLIM7-204ENST00000393546 TRRAPQ9Y4A5 3859 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 GPR31O00270 319 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 ATP6V0E1O15342 81 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 GSTZ1O43708 216 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 RAB3DO95716 219 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 CA2P00918 260 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 UBE2KP61086 200 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 STEAP1BQ6NZ63 245 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 SPAG16Q8N0X2 631 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 ARRDC1Q8N5I2 433 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 FXYD6Q9H0Q3 95 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 TPSG1Q9NRR2 321 aa14.93□□□□□ -0.02
PDLIM7-204ENST00000393546 TRAV41A0A0B4J266 112 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 CNIH1O95406 144 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 CD74P04233 296 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 S100GP29377 79 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 UCP3P55916 312 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 BRWD1-AS2P59051 145 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 TMEM267Q0VDI3 215 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 KHDC1LQ5JSQ8 128 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 AADACL3Q5VUY0 350 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 TREML4Q6UXN2 200 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 POC5Q8NA72 575 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 AIFM2Q9BRQ8 373 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 ZFP57Q9NU63 452 aa14.92□□□□□ -0.02
PDLIM7-204ENST00000393546 A0A1W2PRX2 142 aa14.91□□□□□ -0.02
PDLIM7-204ENST00000393546 RBFOX2O43251 390 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■■■□ 21.4
PDLIM7-204ENST00000393546 PGLYRP1O75594 196 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-204ENST00000393546 TSPAN15O95858 294 aa14.91□□□□□ -0.02
PDLIM7-204ENST00000393546 HRASP01112 189 aa14.91□□□□□ -0.02
PDLIM7-204ENST00000393546 ELANEP08246 267 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms