RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 CIB3Q96Q77 187 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-201ENST00000389589 SH3BGRL3Q9H299 93 aa20.71■□□□□ 0.91
SHOX2-201ENST00000389589 F2RL1P55085 397 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 PJVKQ0ZLH3 352 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 Q6ZRG5 221 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 C1orf229Q6ZS94 237 aaPredicted RBP20.7■□□□□ 0.9
SHOX2-201ENST00000389589 RAB1BQ9H0U4 201 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 HRH4Q9H3N8 390 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 CBLN4Q9NTU7 201 aa20.7■□□□□ 0.9
SHOX2-201ENST00000389589 RBMXL2O75526 392 aaKnown RBP20.69■□□□□ 0.9
SHOX2-201ENST00000389589 ATP6V0CP27449 155 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 AARDQ4LEZ3 155 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 CACFD1Q9UGQ2 172 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 TRIM77I1YAP6 450 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 CCL3L1P16619 93 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 COL8A2P25067 703 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 SPANXN5Q5MJ07 72 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 BTNL8Q6UX41 500 aa20.69■□□□□ 0.9
SHOX2-201ENST00000389589 LY86O95711 162 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 IFNA5P01569 189 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 METTL15P1P0C7V9 234 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 PKD1L2Q7Z442 2459 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 TSNAXQ99598 290 aaKnown RBP20.68■□□□□ 0.9
SHOX2-201ENST00000389589 TRBV23-1A0A0A0MS06 115 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 UMAD1C9J7I0 102 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 TMEM14EPQ6UXP3 125 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 LYPD6BQ8NI32 183 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 DTD1Q8TEA8 209 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 TPRP12270 2363 aaKnown RBP20.68■□□□□ 0.9
SHOX2-201ENST00000389589 ABCA4P78363 2273 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 DOCK11Q5JSL3 2073 aa20.68■□□□□ 0.9
SHOX2-201ENST00000389589 C8orf31Q8N9H6 132 aa20.67■□□□□ 0.9
SHOX2-201ENST00000389589 OR2G3Q8NGZ4 309 aa20.67■□□□□ 0.9
SHOX2-201ENST00000389589 OR9G9P0C7N8 305 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 GNLYP22749 145 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 CAMLGP49069 296 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 TUSC1Q2TAM9 212 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 ZNF383Q8NA42 475 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 BPIFCQ8NFQ6 507 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 OR4A16Q8NH70 328 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 ITLN2Q8WWU7 325 aaPredicted RBP20.66■□□□□ 0.9
SHOX2-201ENST00000389589 IGHV2-70P01814 119 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 PRH1P02810 166 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 TMEM155Q4W5P6 130 aa20.66■□□□□ 0.9
SHOX2-201ENST00000389589 TMEM182Q6ZP80 229 aaPredicted RBP20.66■□□□□ 0.9
SHOX2-201ENST00000389589 LYNX1G3V0Z9 82 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 LYNX1P0DP58 116 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 C11orf71Q6IPW1 123 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 OR52E5Q8NH55 327 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 FAM122AQ96E09 287 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 NUP50Q9UKX7 468 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 CEBPZOSA8MTT3 80 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 UQCRFS1P47985 274 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 DLX6P56179 175 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 SLC25A24Q6NUK1 477 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 ZNF833PQ6ZTB9 187 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 SSX9Q7RTT3 188 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 ZNF525Q8N782 197 aa20.65■□□□□ 0.9
SHOX2-201ENST00000389589 QTRT1Q9BXR0 403 aaKnown RBP20.65■□□□□ 0.9
SHOX2-201ENST00000389589 RALYQ9UKM9 306 aaKnown RBP20.65■□□□□ 0.9
SHOX2-201ENST00000389589 SMG1Q96Q15 3661 aaKnown RBP20.64■□□□□ 0.89
SHOX2-201ENST00000389589 GPR37O15354 613 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 CRYZL1O95825 349 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 ARL16Q0P5N6 197 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 DHRS7BQ6IAN0 325 aaPredicted RBP20.64■□□□□ 0.89
SHOX2-201ENST00000389589 HAPLN4Q86UW8 402 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 LILRB2Q8N423 598 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 LINC00311Q8N616 119 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 COMMD1Q8N668 190 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 ZNF596Q8TC21 504 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 TMEM140Q9NV12 185 aa20.64■□□□□ 0.89
SHOX2-201ENST00000389589 HRASP01112 189 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 ERVFRD-1P60508 538 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 SPCS3P61009 180 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 SCGB1C1Q8TD33 95 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 NEU4Q8WWR8 484 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-201ENST00000389589 NARS2Q96I59 477 aaKnown RBP20.63■□□□□ 0.89
SHOX2-201ENST00000389589 PARD6GQ9BYG4 376 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-201ENST00000389589 SCAF4O95104 1147 aaKnown RBP20.63■□□□□ 0.89
SHOX2-201ENST00000389589 CT45A6P0DMU7 189 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 CT45A5P0DMU8 189 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 CT45A7P0DMV0 189 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 ZNF616Q08AN1 781 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 RTL8BQ17RB0 113 aa20.63■□□□□ 0.89
SHOX2-201ENST00000389589 PDLIM3Q53GG5 364 aaPredicted RBP20.63■□□□□ 0.89
SHOX2-201ENST00000389589 TSPAN15O95858 294 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 IFNA17P01571 189 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 RELBQ01201 579 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 SLC38A11Q08AI6 406 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 POU2AF1Q16633 256 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 FAM71F2Q6NXP2 309 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 ZDHHC16Q969W1 377 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 OR4C12Q96R67 309 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 A0A087X0M5 115 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 A0A1B0GX30 115 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 OR8U8P0C7N1 319 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 OR2B8PP59922 312 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 TAGLNQ01995 201 aaKnown RBP20.62■□□□□ 0.89
SHOX2-201ENST00000389589 ATP6V1FQ16864 119 aa20.62■□□□□ 0.89
SHOX2-201ENST00000389589 DTX2Q86UW9 622 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms