RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 TMEM203Q969S6 136 aa13.59□□□□□ -0.23
RPUSD3-201ENST00000383820 FAM3DQ96BQ1 224 aa13.59□□□□□ -0.23
RPUSD3-201ENST00000383820 SCN3BQ9NY72 215 aa13.59□□□□□ -0.23
RPUSD3-201ENST00000383820 NKX1-2Q9UD57 310 aaPredicted RBP13.59□□□□□ -0.23
RPUSD3-201ENST00000383820 AK6Q9Y3D8 172 aaKnown RBP13.59□□□□□ -0.23
RPUSD3-201ENST00000383820 TRBV6-7A0A0A0MS04 114 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 A0A0B4J203 849 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 SHISA3A0PJX4 238 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 TRBV12-3P01733 135 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 CD3GP09693 182 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 OR9G9P0C7N8 305 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 TPBGQ13641 420 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 IRF3Q14653 427 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 C2orf76Q3KRA6 126 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 VMA21Q3ZAQ7 101 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 ADAMTSL5Q6ZMM2 481 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 LAX1Q8IWV1 398 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 ADAD2Q8NCV1 583 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 ADTRPQ96IZ2 230 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 PHB2Q99623 299 aa13.58□□□□□ -0.24
RPUSD3-201ENST00000383820 MSGN1A6NI15 193 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 FAM223BA6NKX1 122 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 SRRM4A7MD48 611 aaKnown RBP13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 BET1O15155 118 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 DENRO43583 198 aaKnown RBP13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 FCGR3AP08637 254 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 PSMD7P51665 324 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 UBE2KP61086 200 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 MRGPRG-AS1Q2M3A8 158 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 IGSF11Q5DX21 431 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 FAM223AQ8IWN6 122 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 CENPOQ9BU64 300 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 RAB22AQ9UL26 194 aa13.57□□□□□ -0.24
RPUSD3-201ENST00000383820 IZUMO1RA6ND01 250 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 JTBO76095 146 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 CLDN12P56749 244 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 DEFA5Q01523 94 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 PRSS8Q16651 343 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 FAM209BQ5JX69 171 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 SRSF12Q8WXF0 261 aaKnown RBP13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 DDB2Q92466 427 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 RAB3CQ96E17 227 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 C5orf30Q96GV9 206 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 KCNK7Q9Y2U2 307 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 CEPT1Q9Y6K0 416 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 V9GY05 133 aa13.56□□□□□ -0.24
RPUSD3-201ENST00000383820 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 RBMXL2O75526 392 aaKnown RBP13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 GSTT2P0CG29 244 aa13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 AQP4P55087 323 aa13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 RPS25P62851 125 aaKnown RBP13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 TNXAQ16473 311 aa13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 OSR1Q8TAX0 266 aaPredicted RBP13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 RBM7Q9Y580 266 aaKnown RBP13.55□□□□□ -0.24
RPUSD3-201ENST00000383820 TMEM272A0A1B0GTI8 110 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 BMPR1BO00238 502 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 MPPED1O15442 326 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 CREBL2O60519 120 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 APELAP0DMC3 54 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 CALRP27797 417 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 DUTP33316 252 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 RHOGP84095 191 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 MLLT11Q13015 90 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 EXOSC2Q13868 293 aaKnown RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 AKIP1Q9NQ31 210 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 TPRKBQ9Y3C4 175 aa13.54□□□□□ -0.24
RPUSD3-201ENST00000383820 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 MFNGO00587 321 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 TUSC2O75896 110 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 TPPPO94811 219 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 CRYZL1O95825 349 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 HSMCR30P0CW71 290 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 GADD45AP24522 165 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 CD81P60033 236 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 ATP5G2Q06055 141 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 Q6ZS49 121 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 OR10R2Q8NGX6 335 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 ACOT12Q8WYK0 555 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 SPIN2AQ99865 258 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 SPIN2BQ9BPZ2 258 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 NEURL2Q9BR09 285 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 GINS4Q9BRT9 223 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 DUSP21Q9H596 190 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 PLEKHA3Q9HB20 300 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 ACOT13Q9NPJ3 140 aa13.53□□□□□ -0.24
RPUSD3-201ENST00000383820 ACTL6BO94805 426 aa13.52□□□□□ -0.25
RPUSD3-201ENST00000383820 FABP5Q01469 135 aa13.52□□□□□ -0.25
RPUSD3-201ENST00000383820 CDK10Q15131 360 aa13.52□□□□□ -0.25
RPUSD3-201ENST00000383820 CD300EQ496F6 205 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-201ENST00000383820 MMD2Q8IY49 270 aa13.52□□□□□ -0.25
RPUSD3-201ENST00000383820 H1FOOQ8IZA3 346 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms