RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TIMM8BQ9Y5J9 83 aaPredicted RBP11.7□□□□□ -0.54
SDC1-202ENST00000381150 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
SDC1-202ENST00000381150 OR8B8Q15620 311 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
SDC1-202ENST00000381150 LINC01551Q86U37 167 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 SYNGR3O43761 229 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 ZG16O60844 167 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 LINC00205P59089 165 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 LPAL2Q16609 132 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 UNQ5815/PRO19632Q6UWF5 114 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 CT55Q8WUE5 264 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
SDC1-202ENST00000381150 SERTAD4Q9NUC0 356 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 BOD1L1Q8NFC6 3051 aa11.69□□□□□ -0.54
SDC1-202ENST00000381150 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 RBFOX2O43251 390 aaKnown RBP eCLIP11.68□□□□□ -0.54
SDC1-202ENST00000381150 TNFSF13O75888 250 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 SSPNQ14714 243 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 C10orf35Q96D05 121 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 ABCA1O95477 2261 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 PINLYPA6NC86 204 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 CA6P23280 308 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 PDLIM4P50479 330 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 GNB1P62873 340 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 KRTAP27-1Q3LI81 207 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 STPG4Q8N801 248 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 OR1L1Q8NH94 360 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 KCNE4Q8WWG9 221 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 APH1AQ96BI3 265 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 SFRP2Q96HF1 295 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 LOXL2Q9Y4K0 774 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 GJE1A6NN92 205 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 P04436 131 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 SOX8P57073 446 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 ZNF552Q9H707 407 aaPredicted RBP11.68□□□□□ -0.54
SDC1-202ENST00000381150 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 PXMP4Q9Y6I8 212 aa11.68□□□□□ -0.54
SDC1-202ENST00000381150 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 RAMP3O60896 148 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 LINC00614P0C842 121 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 ASPHD1Q5U4P2 390 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 C6orf15Q6UXA7 325 aaPredicted RBP11.67□□□□□ -0.54
SDC1-202ENST00000381150 OR10G8Q8NGN5 311 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 ABHD14BQ96IU4 210 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 TECTBQ96PL2 329 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 VPS25Q9BRG1 176 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 GPR35Q9HC97 309 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 IGHV3-13P01766 116 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 IGHV3-7P01780 117 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 ZNF883P0CG24 379 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 ABHD3Q8WU67 409 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 OR2H1Q9GZK4 316 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 POLEQ07864 2286 aa11.67□□□□□ -0.54
SDC1-202ENST00000381150 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 OR6C6A6NF89 314 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 DEGS1O15121 323 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 VAMP3Q15836 100 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 GCM1Q9NP62 436 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 TMEM38BQ9NVV0 291 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 SCO2A0A1W2PP80 73 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 NGFP01138 241 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 GFRA1P56159 465 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 WIPI1Q5MNZ9 446 aaPredicted RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 SP5Q6BEB4 398 aaPredicted RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 WNT5BQ9H1J7 359 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 WIPI2Q9Y4P8 454 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 GPR179Q6PRD1 2367 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 FXYD3Q14802 87 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 OR8I2Q8N0Y5 310 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 CPT1CQ8TCG5 803 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 C22orf15Q8WYQ4 148 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 ELOVL5Q9NYP7 299 aa11.66□□□□□ -0.54
SDC1-202ENST00000381150 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
SDC1-202ENST00000381150 ZNF253O75346 499 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.54
SDC1-202ENST00000381150 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 FBXL7Q9UJT9 491 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 ZFP30Q9Y2G7 519 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 DEFB108AA8MXU0 73 aa11.65□□□□□ -0.54
SDC1-202ENST00000381150 C9orf172C9J069 976 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms