RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CLEC2LP0C7M8 214 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 HLA-DRB3P79483 266 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 CBX3Q13185 183 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 P2RY14Q15391 338 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 RPEL1Q2QD12 228 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 OR10K2Q6IF99 312 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 OR2K2Q8NGT1 345 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 TM2D1Q9BX74 207 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 C11orf54Q9H0W9 315 aaPredicted RBP12.19□□□□□ -0.46
VCX3A-201ENST00000381089 PLGRKTQ9HBL7 147 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 CEPT1Q9Y6K0 416 aa12.19□□□□□ -0.46
VCX3A-201ENST00000381089 TRBV6-6A0A0A6YYG2 114 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 OR2A4O95047 310 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 GABARAPO95166 117 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 BRI3O95415 125 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 RAB3BP20337 219 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 HTR2CP28335 458 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 SDC2P34741 201 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 VBP1P61758 197 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 HES5Q5TA89 166 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 PTX4Q96A99 478 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 TINAGL1Q9GZM7 467 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-201ENST00000381089 PARP12Q9H0J9 701 aaKnown RBP12.18□□□□□ -0.46
VCX3A-201ENST00000381089 KCNK15Q9H427 330 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 OR1A1Q9P1Q5 309 aa12.18□□□□□ -0.46
VCX3A-201ENST00000381089 TPPPO94811 219 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 BPNT1O95861 308 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 SERPINB10P48595 397 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 CLDN12P56749 244 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 RAB11BQ15907 218 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 LAX1Q8IWV1 398 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 ZNF383Q8NA42 475 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 BVESQ8NE79 360 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 OR6M1Q8NGM8 313 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 PHB2Q99623 299 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 THAP7Q9BT49 309 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-201ENST00000381089 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
VCX3A-201ENST00000381089 SLC35D1Q9NTN3 355 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 SLC2A8Q9NY64 477 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 COA4Q9NYJ1 87 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 V9GY05 133 aa12.17□□□□□ -0.46
VCX3A-201ENST00000381089 M0R1X1 148 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
VCX3A-201ENST00000381089 CSN3P07498 182 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 CD81P60033 236 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 C1orf100Q5SVJ3 147 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.16□□□□□ -0.46
VCX3A-201ENST00000381089 HIPK2Q9H2X6 1198 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 C12orf4Q9NQ89 552 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 AK3Q9UIJ7 227 aa12.16□□□□□ -0.46
VCX3A-201ENST00000381089 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 SLC17A2O00624 439 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 TAGLNQ01995 201 aaKnown RBP12.15□□□□□ -0.46
VCX3A-201ENST00000381089 CTF1Q16619 201 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 RETNQ9HD89 108 aa12.15□□□□□ -0.46
VCX3A-201ENST00000381089 IFITM5A6NNB3 132 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 NOTOA8MTQ0 251 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 TMEM14DPA8MWL7 114 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 SCTP09683 121 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 PSMD7P51665 324 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 UNC119Q13432 240 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 SFXN4Q6P4A7 337 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 TPRA1Q86W33 373 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 NEURL2Q9BR09 285 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 Q9N2K0 584 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 RDH8Q9NYR8 311 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 HSF4Q9ULV5 492 aa12.14□□□□□ -0.47
VCX3A-201ENST00000381089 PLECQ15149 4684 aaKnown RBP12.14□□□□□ -0.47
VCX3A-201ENST00000381089 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 SHOXO15266 292 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 MPPED1O15442 326 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 PROP1O75360 226 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 SNRPBP14678 240 aaKnown RBP12.13□□□□□ -0.47
VCX3A-201ENST00000381089 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
VCX3A-201ENST00000381089 LINC00205P59089 165 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
VCX3A-201ENST00000381089 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 DYRK1AQ13627 763 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 RTL8BQ17RB0 113 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 RAB2BQ8WUD1 216 aa12.13□□□□□ -0.47
VCX3A-201ENST00000381089 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
VCX3A-201ENST00000381089 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
VCX3A-201ENST00000381089 FAM223BA6NKX1 122 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 TRDCB7Z8K6 153 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 SOCS1O15524 211 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 TUSC2O75896 110 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 IGLV2-23P01705 113 aa12.12□□□□□ -0.47
VCX3A-201ENST00000381089 TRBV12-3P01733 135 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms