RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TBC1D26Q86UD7 250 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 PDPNQ86YL7 162 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 C7orf50Q9BRJ6 194 aaKnown RBP10.1□□□□□ -0.79
SMN1-202ENST00000380707 VSIG4Q9Y279 399 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 PRELID3BQ9Y3B1 194 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 COL6A5A8TX70 2615 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 NCBP2LA6PVI3 153 aaKnown RBP10.09□□□□□ -0.79
SMN1-202ENST00000380707 MPPED1O15442 326 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 AMY1AP04745 511 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
SMN1-202ENST00000380707 RND3P61587 244 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 RTL8BQ17RB0 113 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 OR4C13Q8NGP0 309 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 FLYWCH2Q96CP2 140 aaKnown RBP10.09□□□□□ -0.79
SMN1-202ENST00000380707 RAB18Q9NP72 206 aa10.09□□□□□ -0.79
SMN1-202ENST00000380707 SRRM4A7MD48 611 aaKnown RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 CRYZL1O95825 349 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 RRASP10301 218 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 F2RP25116 425 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 S100GP29377 79 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 BLCAPP62952 87 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 RELBQ01201 579 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 CATR1Q13166 79 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 ASAH1Q13510 395 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 MMDQ15546 238 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 DHRS7BQ6IAN0 325 aaPredicted RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 C16orf82Q7Z2V1 217 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 ADAD2Q8NCV1 583 aaKnown RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 ZFAND2BQ8WV99 257 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 SLC25A21Q9BQT8 299 aaPredicted RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 COPZ2Q9P299 210 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 C14orf166Q9Y224 244 aaKnown RBP10.08□□□□□ -0.8
SMN1-202ENST00000380707 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 ANK2Q01484 3957 aa10.08□□□□□ -0.8
SMN1-202ENST00000380707 SH2D7A6NKC9 451 aaPredicted RBP10.07□□□□□ -0.8
SMN1-202ENST00000380707 RNF212BA8MTL3 300 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 CBX3Q13185 183 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 RBMS2Q15434 407 aaKnown RBP10.07□□□□□ -0.8
SMN1-202ENST00000380707 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 FAM71E2Q8N5Q1 922 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 Q8N9W7 124 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 NPBQ8NG41 125 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 HARBI1Q96MB7 349 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 SCGB3A2Q96PL1 93 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 RNF5Q99942 180 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 C1RLQ9NZP8 487 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 SHOXO15266 292 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 NBR2O15453 112 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 RBFOX2O43251 390 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMN1-202ENST00000380707 NDUFB6O95139 128 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 IGLV2-23P01705 113 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 SLC6A1P30531 599 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 KIR2DS2P43631 304 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 RPL15P61313 204 aaKnown RBP10.07□□□□□ -0.8
SMN1-202ENST00000380707 ZNF585BQ52M93 769 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 Q6ZS46 218 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 POC5Q8NA72 575 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 OR8H1Q8NGG4 311 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
SMN1-202ENST00000380707 FLVCR2Q9UPI3 526 aa10.07□□□□□ -0.8
SMN1-202ENST00000380707 CRYM-AS1A6NIL9 109 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 M0QZK8 103 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 FGF16O43320 207 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 NDUFA3O95167 84 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 CRYBA1P05813 215 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 AKR1C4P17516 323 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 LGALS7P47929 136 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 PSG5Q15238 335 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 SP6Q3SY56 376 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 Q6ZSV7 163 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 TMED4Q7Z7H5 227 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 VKORC1L1Q8N0U8 176 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
SMN1-202ENST00000380707 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 OSR1Q8TAX0 266 aaPredicted RBP10.06□□□□□ -0.8
SMN1-202ENST00000380707 CD300LFQ8TDQ1 290 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 TSNAXQ99598 290 aaKnown RBP10.06□□□□□ -0.8
SMN1-202ENST00000380707 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 FBXL15Q9H469 300 aa10.06□□□□□ -0.8
SMN1-202ENST00000380707 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
SMN1-202ENST00000380707 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 RRHO14718 337 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 SLC25A17O43808 307 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 S1PR2O95136 353 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 HPRT1P00492 218 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 LPAR6P43657 344 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 RIPPLY3P57055 190 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 C5orf64Q2M2E5 130 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
SMN1-202ENST00000380707 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms