RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 CRYZL1O95825 349 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 LY6G6DO95868 133 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 ARHGDIBP52566 201 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 BPIFB3P59826 476 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 SRPXP78539 464 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 IL17RELQ6ZVW7 336 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 ZNF695Q8IW36 515 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 LGI3Q8N145 548 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 LHFPL5Q8TAF8 219 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
CCDC107-204ENST00000378409 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
CCDC107-204ENST00000378409 RBFOX2O43251 390 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC107-204ENST00000378409 S1PR2O95136 353 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 CDS2O95674 445 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 RRASP10301 218 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 FOSL1P15407 271 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 MC5RP33032 325 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 RAB13P51153 203 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 TMEM268Q5VZI3 342 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 PDPNQ86YL7 162 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 SELENOHQ8IZQ5 122 aaKnown RBP12.71□□□□□ -0.37
CCDC107-204ENST00000378409 CFHR4Q92496 578 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 TMEM56Q96MV1 263 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 MED28Q9H204 178 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 TMEM56-RWDD3S4R434 201 aa12.71□□□□□ -0.37
CCDC107-204ENST00000378409 SONP18583 2426 aaKnown RBP12.7□□□□□ -0.38
CCDC107-204ENST00000378409 A0A0B4J2A0 478 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 HPRT1P00492 218 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 IGKV1-39P01597 117 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 IGKV1D-39P04432 117 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 FBP1P09467 338 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 RPA2P15927 270 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 HNF1AP20823 631 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 BRS3P32247 399 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
CCDC107-204ENST00000378409 RIPPLY3P57055 190 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
CCDC107-204ENST00000378409 BCL6BQ8N143 479 aaPredicted RBP12.7□□□□□ -0.38
CCDC107-204ENST00000378409 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 RBPMSQ93062 196 aaKnown RBP12.7□□□□□ -0.38
CCDC107-204ENST00000378409 SHPKQ9UHJ6 478 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 CELSR1Q9NYQ6 3014 aa12.7□□□□□ -0.38
CCDC107-204ENST00000378409 SHOXO15266 292 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 VENTXO95231 258 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 HOXB5P09067 269 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 CD24P25063 80 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 CD1BP29016 333 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
CCDC107-204ENST00000378409 HES1Q14469 280 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 HABP2Q14520 560 aaPredicted RBP12.69□□□□□ -0.38
CCDC107-204ENST00000378409 CLEC9AQ6UXN8 241 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 CADM3Q8N126 398 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 SLC35G3Q8N808 338 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 LRTM2Q8N967 370 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 OR4C13Q8NGP0 309 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 RNASE11Q8TAA1 199 aaKnown RBP12.69□□□□□ -0.38
CCDC107-204ENST00000378409 IL22RA2Q969J5 263 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 FLYWCH2Q96CP2 140 aaKnown RBP12.69□□□□□ -0.38
CCDC107-204ENST00000378409 MEGF9Q9H1U4 602 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 PLEKHA2Q9HB19 425 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
CCDC107-204ENST00000378409 F8P00451 2351 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 CCSO14618 274 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 ADAP1O75689 374 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 KRASP01116 189 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 IGKV1D-33P01593 117 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 IGKV1-33P01594 117 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 SNRNP70P08621 437 aaKnown RBP12.68□□□□□ -0.38
CCDC107-204ENST00000378409 G6PCP35575 357 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 BCAP31P51572 246 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 AKR1C2P52895 323 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 RPS16P62249 146 aaKnown RBP12.68□□□□□ -0.38
CCDC107-204ENST00000378409 TMEM177Q53S58 311 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
CCDC107-204ENST00000378409 PIGBOS1A0A0B4J2F0 54 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 GOSR2O14653 212 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 ATG12O94817 140 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 HRASP01112 189 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 IFNA21P01568 189 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 NQO2P16083 231 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 ERVK-16P61578 105 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 HNF4GQ14541 408 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 FCN2Q15485 313 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 LRRC75BQ2VPJ9 315 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 DEFB112Q30KQ8 113 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 C9orf139Q6ZV77 190 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 SSX9Q7RTT3 188 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
CCDC107-204ENST00000378409 OSR1Q8TAX0 266 aaPredicted RBP12.67□□□□□ -0.38
CCDC107-204ENST00000378409 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms